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The map label for this gene is dcd [H]

Identifier: 123965512

GI number: 123965512

Start: 256729

End: 257322

Strand: Reverse

Name: dcd [H]

Synonym: P9515_02771

Alternate gene names: 123965512

Gene position: 257322-256729 (Counterclockwise)

Preceding gene: 123965513

Following gene: 123965511

Centisome position: 15.1

GC content: 35.02

Gene sequence:

>594_bases
ATGCTGAAAAATGATCTCTGGATAAACCAAAAAGCTTCCGAAGGAATGATCAACCCTTTCCAATCAAACTTGGTAAGACA
CCTTGATCCAACTCTGAAAAAAAACGCAGTTTTAAGTTATGGCTGTTCATCATATGGCTATGATTTAAGACTTTCTTCTA
AAGAGTTTTTAATATTTAAGCATGTCCCGGGAACTGTTATGAATCCAAAGAAGTTTAATCCTGATAATTTAGAAAAAACT
GTTCTTCATAAAGACAAAGATGGTGAGTTTTTTATTTTACCTGCTCATTCTTATGGCTTGGGTGTCGCTCTAGAAAAAAT
GAAAGTGCCAGAAAATATTACTGTTATATGTATTGGTAAAAGTACTTATGCCCGTCTTGGAATAATAGTAAACACAACCC
CAGCGGAAGCCGGATGGGAGGGGCACCTTACATTAGAATTCAGTAACAGTTCTGGTGCTGATTGTAGAATTTATGCAAAT
GAAGGTATTTGTCAACTATTGTTTTTTGAGGGTGATCCCTGTTCTACAACGTATGAAGATAGGAAAGGTAAATATCAAAA
TCAACCAGAACAAGTAACTTTAGCCAAAATTTAA

Upstream 100 bases:

>100_bases
ACCGATTCATAACTGGAGATGTAATCCTTACTGGTACAAACATTCCTAAAAATTTCTTATTAATGGCTGACCAAATTACA
GAGCTTCGCTCATAAAAATT

Downstream 100 bases:

>100_bases
AATGAGTAGAGTTGAGCTTATTACACTAACTCCAGATGCGGAAAAAACAATGGCTTTTATAGCCAGAGTTTCTAATCCTT
CTAATCAAGATAATGATAAA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLKNDLWINQKASEGMINPFQSNLVRHLDPTLKKNAVLSYGCSSYGYDLRLSSKEFLIFKHVPGTVMNPKKFNPDNLEKT
VLHKDKDGEFFILPAHSYGLGVALEKMKVPENITVICIGKSTYARLGIIVNTTPAEAGWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCSTTYEDRKGKYQNQPEQVTLAKI

Sequences:

>Translated_197_residues
MLKNDLWINQKASEGMINPFQSNLVRHLDPTLKKNAVLSYGCSSYGYDLRLSSKEFLIFKHVPGTVMNPKKFNPDNLEKT
VLHKDKDGEFFILPAHSYGLGVALEKMKVPENITVICIGKSTYARLGIIVNTTPAEAGWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCSTTYEDRKGKYQNQPEQVTLAKI
>Mature_197_residues
MLKNDLWINQKASEGMINPFQSNLVRHLDPTLKKNAVLSYGCSSYGYDLRLSSKEFLIFKHVPGTVMNPKKFNPDNLEKT
VLHKDKDGEFFILPAHSYGLGVALEKMKVPENITVICIGKSTYARLGIIVNTTPAEAGWEGHLTLEFSNSSGADCRIYAN
EGICQLLFFEGDPCSTTYEDRKGKYQNQPEQVTLAKI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 22067; Mature: 22067

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNDLWINQKASEGMINPFQSNLVRHLDPTLKKNAVLSYGCSSYGYDLRLSSKEFLIFK
CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCHHCCEEEEECCCCCCEEEEECCCEEEEEE
HVPGTVMNPKKFNPDNLEKTVLHKDKDGEFFILPAHSYGLGVALEKMKVPENITVICIGK
ECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEAGWEGHLTLEFSNSSGADCRIYANEGICQLLFFEGDPCSTTYED
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RKGKYQNQPEQVTLAKI
CCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLKNDLWINQKASEGMINPFQSNLVRHLDPTLKKNAVLSYGCSSYGYDLRLSSKEFLIFK
CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCHHCCEEEEECCCCCCEEEEECCCEEEEEE
HVPGTVMNPKKFNPDNLEKTVLHKDKDGEFFILPAHSYGLGVALEKMKVPENITVICIGK
ECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECC
STYARLGIIVNTTPAEAGWEGHLTLEFSNSSGADCRIYANEGICQLLFFEGDPCSTTYED
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCCCC
RKGKYQNQPEQVTLAKI
CCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA