| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965426
Identifier: 123965426
GI number: 123965426
Start: 174933
End: 176390
Strand: Reverse
Name: 123965426
Synonym: P9515_01911
Alternate gene names: NA
Gene position: 176390-174933 (Counterclockwise)
Preceding gene: 123965428
Following gene: 123965425
Centisome position: 10.35
GC content: 19.07
Gene sequence:
>1458_bases ATGAATATTAAATTATTAGCTGTATTAACAATATTATCATTATTCCTAATTTTTGGATTTGAAAAAATATCTCATAGCTT AAGTAAAGAAAACCACGAAAATATTTCAGAATTAAAAATTTTAACGTACTTACCTACAGACAATAAAGCATTATTTATTT CAAATTCTAAAATTTCAAAAATCACAAATAACATAAGCAATCACTATGAAGCAAGGGAGCAAGATCAATTTGTTTTAATA AAAGATAGTATTTTTGCGTACCTAGGTATAGATTTAGGTATAAACAATTTAAAAGATATTTATAGTAATGAATTTGCTTT AACTACATATGATAATAAAGAAAAAGATTTTGATGATATTTTAATAATATTCAAAATTAAAGAAAAAAAAGATATAGATG ATATTTTAAATCTTTCTAATAAAATTGATGAGCCTGATAAATTGATAAAAATATATAGAGATAATAAATTAAATTATTTA AAGTATATTTATCGCACTAATGATAATTATATAATTACTTCCTCTAATGAAAACTTAATCCTCAAAGCCTTAGAATCAAG TAAAATTGATAAAAATATTATAAGAAAATACTCTTTTAAAGAGGTATTAAATAATTATAAAAATGAACAGAATATTTTAT TAACTAACAATTTTAAGCAGACTGAACTATTAAACAATGAAAATTATAATATAACAAAAGACGACTATTTAGTAACATTA TTTAAATTTAAAGATAAAGAAATTATATTAAAATCTTACTTAGTAAATAATAATAAGAATTTAGATTTTCAGTCTTATAA AAAAATTAATAAAGAAAATATTGTAAAAAGAAACTATCAAATTTCTACTTATAATAGTTTATTTGATTCTAATAAATATC TTAATCAAATCAAAATAAGTGATTTTGAAAAAGATATTTTTAGAGAATTAAATAAAGAATTAAAACAAAATATACTACTT TTAATTACTGATAATAATTGGTTGATAATTCTTGATAAGAATAATTTTTCTTTTGAGAAGTTAAAATTATTAGAAGATTT AAATAAAAATAGCCTAACAAATAATAATAATGTTTATACAATATATTCGAAAGACATACTCAAAAAAGAAAAAGACATTA TAAAAGAATCTAATTACAAAAAAATTTTTTTAATTCAATCTGAAAATTTAACCTTTATTGGTAACAATTTGGTTAATGAA GCTGAGATAGATTTAATTTCAAAGGAATTTTTTAATTTCAGAGGAGATAGTCAAGCAAAATATTTTTTAAATAAAAAAAT TGATCTAAATCATCCTTACTCTATCCAAGCTAAAAATATCTCTTATTTAGAAAAAATTAATTTCTTTTTTAAAAATGTGA CAAACGTATCAAGTCAAAAATTTACTGAAATAATAAAACAACCTATCCCGGAAACAACCCCTTTATATTATGAAGAAATC AATTTGAAAATATTTTAA
Upstream 100 bases:
>100_bases TTTCGGATAATTTCTCAATTCCTTGAATTAACTAATTCTTATTAACAATTTAATAAGTAAGGTTGCAAGAATATGCTTAT TGTTAAAAATAAAAATAAAA
Downstream 100 bases:
>100_bases TAATTAAATTTGATTGATATCTTATGGTTAACTAAAAATTATTTGACTATCTTAGATCTATAAAGAATTTATATCTTATT AAAATTTGGACCCTAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNIKLLAVLTILSLFLIFGFEKISHSLSKENHENISELKILTYLPTDNKALFISNSKISKITNNISNHYEAREQDQFVLI KDSIFAYLGIDLGINNLKDIYSNEFALTTYDNKEKDFDDILIIFKIKEKKDIDDILNLSNKIDEPDKLIKIYRDNKLNYL KYIYRTNDNYIITSSNENLILKALESSKIDKNIIRKYSFKEVLNNYKNEQNILLTNNFKQTELLNNENYNITKDDYLVTL FKFKDKEIILKSYLVNNNKNLDFQSYKKINKENIVKRNYQISTYNSLFDSNKYLNQIKISDFEKDIFRELNKELKQNILL LITDNNWLIILDKNNFSFEKLKLLEDLNKNSLTNNNNVYTIYSKDILKKEKDIIKESNYKKIFLIQSENLTFIGNNLVNE AEIDLISKEFFNFRGDSQAKYFLNKKIDLNHPYSIQAKNISYLEKINFFFKNVTNVSSQKFTEIIKQPIPETTPLYYEEI NLKIF
Sequences:
>Translated_485_residues MNIKLLAVLTILSLFLIFGFEKISHSLSKENHENISELKILTYLPTDNKALFISNSKISKITNNISNHYEAREQDQFVLI KDSIFAYLGIDLGINNLKDIYSNEFALTTYDNKEKDFDDILIIFKIKEKKDIDDILNLSNKIDEPDKLIKIYRDNKLNYL KYIYRTNDNYIITSSNENLILKALESSKIDKNIIRKYSFKEVLNNYKNEQNILLTNNFKQTELLNNENYNITKDDYLVTL FKFKDKEIILKSYLVNNNKNLDFQSYKKINKENIVKRNYQISTYNSLFDSNKYLNQIKISDFEKDIFRELNKELKQNILL LITDNNWLIILDKNNFSFEKLKLLEDLNKNSLTNNNNVYTIYSKDILKKEKDIIKESNYKKIFLIQSENLTFIGNNLVNE AEIDLISKEFFNFRGDSQAKYFLNKKIDLNHPYSIQAKNISYLEKINFFFKNVTNVSSQKFTEIIKQPIPETTPLYYEEI NLKIF >Mature_485_residues MNIKLLAVLTILSLFLIFGFEKISHSLSKENHENISELKILTYLPTDNKALFISNSKISKITNNISNHYEAREQDQFVLI KDSIFAYLGIDLGINNLKDIYSNEFALTTYDNKEKDFDDILIIFKIKEKKDIDDILNLSNKIDEPDKLIKIYRDNKLNYL KYIYRTNDNYIITSSNENLILKALESSKIDKNIIRKYSFKEVLNNYKNEQNILLTNNFKQTELLNNENYNITKDDYLVTL FKFKDKEIILKSYLVNNNKNLDFQSYKKINKENIVKRNYQISTYNSLFDSNKYLNQIKISDFEKDIFRELNKELKQNILL LITDNNWLIILDKNNFSFEKLKLLEDLNKNSLTNNNNVYTIYSKDILKKEKDIIKESNYKKIFLIQSENLTFIGNNLVNE AEIDLISKEFFNFRGDSQAKYFLNKKIDLNHPYSIQAKNISYLEKINFFFKNVTNVSSQKFTEIIKQPIPETTPLYYEEI NLKIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57532; Mature: 57532
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKLLAVLTILSLFLIFGFEKISHSLSKENHENISELKILTYLPTDNKALFISNSKISK CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCHHHH ITNNISNHYEAREQDQFVLIKDSIFAYLGIDLGINNLKDIYSNEFALTTYDNKEKDFDDI HHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCE LIIFKIKEKKDIDDILNLSNKIDEPDKLIKIYRDNKLNYLKYIYRTNDNYIITSSNENLI EEEEEECCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEECCCEEEECCCCCEE LKALESSKIDKNIIRKYSFKEVLNNYKNEQNILLTNNFKQTELLNNENYNITKDDYLVTL EEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCCEEEEE FKFKDKEIILKSYLVNNNKNLDFQSYKKINKENIVKRNYQISTYNSLFDSNKYLNQIKIS EEECCCCEEEEHHHCCCCCCCCHHHHHHCCHHHHHHCCEEEEEHHHHHCCCHHHCEEECC DFEKDIFRELNKELKQNILLLITDNNWLIILDKNNFSFEKLKLLEDLNKNSLTNNNNVYT HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEE IYSKDILKKEKDIIKESNYKKIFLIQSENLTFIGNNLVNEAEIDLISKEFFNFRGDSQAK EECHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEE YFLNKKIDLNHPYSIQAKNISYLEKINFFFKNVTNVSSQKFTEIIKQPIPETTPLYYEEI EEECCEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEE NLKIF EEEEC >Mature Secondary Structure MNIKLLAVLTILSLFLIFGFEKISHSLSKENHENISELKILTYLPTDNKALFISNSKISK CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCHHHH ITNNISNHYEAREQDQFVLIKDSIFAYLGIDLGINNLKDIYSNEFALTTYDNKEKDFDDI HHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCE LIIFKIKEKKDIDDILNLSNKIDEPDKLIKIYRDNKLNYLKYIYRTNDNYIITSSNENLI EEEEEECCCCCHHHHHHHHHCCCCHHHEEEEEECCCCCEEEEEEEECCCEEEECCCCCEE LKALESSKIDKNIIRKYSFKEVLNNYKNEQNILLTNNFKQTELLNNENYNITKDDYLVTL EEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCCEEEEE FKFKDKEIILKSYLVNNNKNLDFQSYKKINKENIVKRNYQISTYNSLFDSNKYLNQIKIS EEECCCCEEEEHHHCCCCCCCCHHHHHHCCHHHHHHCCEEEEEHHHHHCCCHHHCEEECC DFEKDIFRELNKELKQNILLLITDNNWLIILDKNNFSFEKLKLLEDLNKNSLTNNNNVYT HHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEE IYSKDILKKEKDIIKESNYKKIFLIQSENLTFIGNNLVNEAEIDLISKEFFNFRGDSQAK EECHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEE YFLNKKIDLNHPYSIQAKNISYLEKINFFFKNVTNVSSQKFTEIIKQPIPETTPLYYEEI EEECCEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEE NLKIF EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA