| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965266
Identifier: 123965266
GI number: 123965266
Start: 31190
End: 31609
Strand: Reverse
Name: 123965266
Synonym: P9515_00311
Alternate gene names: NA
Gene position: 31609-31190 (Counterclockwise)
Preceding gene: 123965267
Following gene: 123965265
Centisome position: 1.85
GC content: 34.05
Gene sequence:
>420_bases ATGAAAAGATGCATAAAGGTTAAATTACTTTTACCTATAGTTGCTATATTTGTCCCGACCTTACTATTTATCCCAAAAGC TAGTGCAGGTTCGTTTGGAGCGGAAATATTTTGTACTATGAGAGACGGTGGCAATGATCATGAAAGCAGCTGGCAATCGG CCTACAGCTACATTAAAAAACAAAAAGGTGGGCTTTTTAAGACGTCTCCAAAACAAGCCGCTGGACAAATTATTGAGACT GTTGTTAGAGAAAGAGATAAATTTTCTTATTGCGTTGAATATTTAGATCAACTTCATCCTGACAGAAAACTTCAAATGGA AAATAATAGAAAAGAAAAAAGGAAAAAACAAGAAGAGCGTCTTCGAGAAAAAGAAAATATAAACTACTCTGAAGAATCCT TTGATAGATACAGTTATTAA
Upstream 100 bases:
>100_bases AATTGTAAAAATGCTAACCCTGGCAGGAGTCATCAAATCTTAAAGATCTCTAGACATAATCAAAATAAAAGATATTTTTA AATAGACAATTAAAAAAAAA
Downstream 100 bases:
>100_bases TTTTTAGAAAATAAATAATTACTTTTAGCTCACAAGTTAAATATAATTTTTTGAGTATAATCGTATACACAAAATATTTT TTATATGAAAAATATATAGA
Product: type II secretion system protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY
Sequences:
>Translated_139_residues MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY >Mature_139_residues MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16293; Mature: 16293
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QKGGLFKTSPKQAAGQIIETVVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEER HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH LREKENINYSEESFDRYSY HHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QKGGLFKTSPKQAAGQIIETVVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEER HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH LREKENINYSEESFDRYSY HHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA