| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965263
Identifier: 123965263
GI number: 123965263
Start: 29462
End: 30343
Strand: Reverse
Name: 123965263
Synonym: P9515_00281
Alternate gene names: NA
Gene position: 30343-29462 (Counterclockwise)
Preceding gene: 123965265
Following gene: 123965262
Centisome position: 1.78
GC content: 30.05
Gene sequence:
>882_bases ATGATCGATTTAGCAAGTCCACTAACAATAAAAAATAAATTTGTAATCTTTGGAGGAGGTTTTAGTGGAGACTATTTTGC TAAATCAATCAGAAAGCTAGGATGCACAGCTTTAACAAGTTCTAGATCAGCCAATAATGACCCCAATAGTTTTATTTTTA ATAGTGAAAATAACTTATTACCTGAAGATTCAATACTTGATGGAGTTACACATATACTTAGTTGCATACCACCCGACAAA AATGGTAATGACCCAGTACTAAAAAGTCTAAAAAATAAAATAAATAATCTTTCTGTCAAGTGGGTTGGATATCTTTCTAC CACTGGGGTCTATGGTAATACTCATGGTGATTGGGTATCTGAAAAAGATGAACCCAACCCCTTACAACAAAGAAGTCAAA GAAGATTAAATTGTGAAAAAGAATGGATTCATTCAAATTTGCCAATTCAAATCTTCAGATTACCTGGAATTTATGGACCG GGAAGATCAACTTTGGAAGCCATTACAACTAAAAAAATTAAAGTGATCCATAAAGATAATCAAGTTTTTTCGAGAATACA TGTTGCTGATATCGCAAATGCAATTATCTACTTAATTCAGAATAAAAATAAATTAGATTTTCATCAAATAATTAATATCG CTGATGACGAACCTTGCTCACAGATTGAAGTCATAAGATATGGCTATCAATTACTTGGATTAAGGATGCCTAAAAAAATA TTATTTGAAGAGGCTAAAAAAGATTTATCTCCAATAGCTCAATCATTTTGGTTAGAAAACAGAAGAGTATCTAATAAATT ATTATGTGAAGAATTAGGATACAAACTTATTTACAAAAACTATCAAGTAGGTTTAGATAATTGTCTTATTAACATTAAAT AA
Upstream 100 bases:
>100_bases ATAAGTTGAATTATCAAAACTAGCTATCTTTACTTTTACCTCAGGCTGGTTCAAGGTTTGCATTTTCTTCATAATACATA TGTACTAGTTATAATACTAC
Downstream 100 bases:
>100_bases ATAATAATTTGATTTTATGACATTAATTAATAATCAAATCAAACGTTTTAGGAGAACATGAATCCTTTAATTTTCCACAT CAAAATTTTATTATGAGTAA
Product: nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MIDLASPLTIKNKFVIFGGGFSGDYFAKSIRKLGCTALTSSRSANNDPNSFIFNSENNLLPEDSILDGVTHILSCIPPDK NGNDPVLKSLKNKINNLSVKWVGYLSTTGVYGNTHGDWVSEKDEPNPLQQRSQRRLNCEKEWIHSNLPIQIFRLPGIYGP GRSTLEAITTKKIKVIHKDNQVFSRIHVADIANAIIYLIQNKNKLDFHQIINIADDEPCSQIEVIRYGYQLLGLRMPKKI LFEEAKKDLSPIAQSFWLENRRVSNKLLCEELGYKLIYKNYQVGLDNCLINIK
Sequences:
>Translated_293_residues MIDLASPLTIKNKFVIFGGGFSGDYFAKSIRKLGCTALTSSRSANNDPNSFIFNSENNLLPEDSILDGVTHILSCIPPDK NGNDPVLKSLKNKINNLSVKWVGYLSTTGVYGNTHGDWVSEKDEPNPLQQRSQRRLNCEKEWIHSNLPIQIFRLPGIYGP GRSTLEAITTKKIKVIHKDNQVFSRIHVADIANAIIYLIQNKNKLDFHQIINIADDEPCSQIEVIRYGYQLLGLRMPKKI LFEEAKKDLSPIAQSFWLENRRVSNKLLCEELGYKLIYKNYQVGLDNCLINIK >Mature_293_residues MIDLASPLTIKNKFVIFGGGFSGDYFAKSIRKLGCTALTSSRSANNDPNSFIFNSENNLLPEDSILDGVTHILSCIPPDK NGNDPVLKSLKNKINNLSVKWVGYLSTTGVYGNTHGDWVSEKDEPNPLQQRSQRRLNCEKEWIHSNLPIQIFRLPGIYGP GRSTLEAITTKKIKVIHKDNQVFSRIHVADIANAIIYLIQNKNKLDFHQIINIADDEPCSQIEVIRYGYQLLGLRMPKKI LFEEAKKDLSPIAQSFWLENRRVSNKLLCEELGYKLIYKNYQVGLDNCLINIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33222; Mature: 33222
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLASPLTIKNKFVIFGGGFSGDYFAKSIRKLGCTALTSSRSANNDPNSFIFNSENNLL CCCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC PEDSILDGVTHILSCIPPDKNGNDPVLKSLKNKINNLSVKWVGYLSTTGVYGNTHGDWVS CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCCCCC EKDEPNPLQQRSQRRLNCEKEWIHSNLPIQIFRLPGIYGPGRSTLEAITTKKIKVIHKDN CCCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEECCC QVFSRIHVADIANAIIYLIQNKNKLDFHQIINIADDEPCSQIEVIRYGYQLLGLRMPKKI HHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH LFEEAKKDLSPIAQSFWLENRRVSNKLLCEELGYKLIYKNYQVGLDNCLINIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCEEEECC >Mature Secondary Structure MIDLASPLTIKNKFVIFGGGFSGDYFAKSIRKLGCTALTSSRSANNDPNSFIFNSENNLL CCCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC PEDSILDGVTHILSCIPPDKNGNDPVLKSLKNKINNLSVKWVGYLSTTGVYGNTHGDWVS CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCCCCCC EKDEPNPLQQRSQRRLNCEKEWIHSNLPIQIFRLPGIYGPGRSTLEAITTKKIKVIHKDN CCCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEEEECCC QVFSRIHVADIANAIIYLIQNKNKLDFHQIINIADDEPCSQIEVIRYGYQLLGLRMPKKI HHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHH LFEEAKKDLSPIAQSFWLENRRVSNKLLCEELGYKLIYKNYQVGLDNCLINIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA