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The map label for this gene is parB [H]

Identifier: 121999216

GI number: 121999216

Start: 2676727

End: 2677620

Strand: Reverse

Name: parB [H]

Synonym: Hhal_2438

Alternate gene names: 121999216

Gene position: 2677620-2676727 (Counterclockwise)

Preceding gene: 121999217

Following gene: 121999215

Centisome position: 99.97

GC content: 70.02

Gene sequence:

>894_bases
ATGTCGAACAAGAAGCGTGGTCTCGGCCGCGGCCTGGATGCCCTGCTCGGTGCCGAGCCCGGCGCCGTCGCCGCCGGTCA
CCCGGTGGATGGCGGCGAGCTTCGCGATCTGCCCGTCGATCTGCTTGAACGCGGCCCCCACCAGCCGCGCCGCCACTTCG
ACGATCAGGCCCTCCAGGAGCTGGCCGACTCCATCCGCGCCCAGGGCGTCGTCCAGCCGCTGGTGGTGCGCCCGACGGAT
ACCGGACGCTTCGAGATCATTGCTGGCGAGCGACGCTGGCGGGCGGCTCAGCGTGCTGGGATTGATACGGTGCCCGCGCT
GGTTCGCGACATCCCCGACGAGGCGGCCATCGCCGTCGGCCTGATCGAGAACCTGCAGCGTGAAGACCTCAACCCGCTGG
AGGCCGCCGGCGCGCTGCAGCGGCTGATTCACGAGTTCGGGCTGTCCCATCAAAAAACCGCGGACGCCGTCGGGCGATCC
CGCACATCGGTGACCAACCTGCTGCGGCTGCTCGAGCTCAACGAGGACGTTCAGCGGTTGATCAGCGAGGGACGCCTGGA
GGCGGGGCACGCCAAGGCGCTTGCTGGCCTGACCGGCACGGCCCAGAGCGAGGCGGCTGCCCGGGTGGCCCGTGACCACC
TCACCGTGCGTCAGACCGAGACCCTGGTACGGCGCTATCAGCAGGCAGCCGACACCTCCGCCGACGACGCCAAAGGGGCG
GCGGGGGAGGGCAAGCGCCTGGATCCCGACGTCGAGCGCCTGCGCGATACGCTCGCCGACCGCCTCGGCGCGCCGGTGGA
TATCCAGCACAGTCGCCGCCAGGGCAAGGGGCGTCTGGTCATCCGCTACAGCAGCCTCGAGGAGCTGGACGGTATCCTCG
GACGTATCCATTGA

Upstream 100 bases:

>100_bases
GCCCTGGCCACCGAGATGGAACGACGCCACCGCAGCGGTCAGGCGGCCACCGCTGCCTCCGCCTGAGCGACCCACCGCAA
CCCGAGGAGAGAGCAGACGT

Downstream 100 bases:

>100_bases
CTAAGCGGCCCTGATTTGACCCCCCTGATGCCGCCGTTTAGACTCCGCCCCTTATCGATGCCGTAGGGCGTACAGCGTGG
AAGTGAGCGAAGCCCTCAAT

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSNKKRGLGRGLDALLGAEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDDQALQELADSIRAQGVVQPLVVRPTD
TGRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEAAIAVGLIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRS
RTSVTNLLRLLELNEDVQRLISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSADDAKGA
AGEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGRIH

Sequences:

>Translated_297_residues
MSNKKRGLGRGLDALLGAEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDDQALQELADSIRAQGVVQPLVVRPTD
TGRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEAAIAVGLIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRS
RTSVTNLLRLLELNEDVQRLISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSADDAKGA
AGEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGRIH
>Mature_296_residues
SNKKRGLGRGLDALLGAEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDDQALQELADSIRAQGVVQPLVVRPTDT
GRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEAAIAVGLIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRSR
TSVTNLLRLLELNEDVQRLISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSADDAKGAA
GEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGRIH

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32244; Mature: 32113

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKKRGLGRGLDALLGAEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDDQALQE
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCHHHHHH
LADSIRAQGVVQPLVVRPTDTGRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEAAIAVG
HHHHHHHCCCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
LIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRSRTSVTNLLRLLELNEDVQRL
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSADDAKGA
HHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGRIH
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHCCC
>Mature Secondary Structure 
SNKKRGLGRGLDALLGAEPGAVAAGHPVDGGELRDLPVDLLERGPHQPRRHFDDQALQE
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCHHHHHH
LADSIRAQGVVQPLVVRPTDTGRFEIIAGERRWRAAQRAGIDTVPALVRDIPDEAAIAVG
HHHHHHHCCCCCCEEECCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
LIENLQREDLNPLEAAGALQRLIHEFGLSHQKTADAVGRSRTSVTNLLRLLELNEDVQRL
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISEGRLEAGHAKALAGLTGTAQSEAAARVARDHLTVRQTETLVRRYQQAADTSADDAKGA
HHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGEGKRLDPDVERLRDTLADRLGAPVDIQHSRRQGKGRLVIRYSSLEELDGILGRIH
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]