| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is 121999215
Identifier: 121999215
GI number: 121999215
Start: 2676228
End: 2676650
Strand: Reverse
Name: 121999215
Synonym: Hhal_2437
Alternate gene names: NA
Gene position: 2676650-2676228 (Counterclockwise)
Preceding gene: 121999216
Following gene: 121999214
Centisome position: 99.93
GC content: 64.3
Gene sequence:
>423_bases GTGGAAGTGAGCGAAGCCCTCAATCAGGACTACGAACCACAGGGCATGTGGCGTAGCCGGGCACCCGCACTGCGGGTCGT GCTCGGTGTCCTCCTGGCCCAGGCCGGTGTCGGTGCCATCGCCGCTGGCCTCTGGCTTCTGGATGGTGGCTGGTCGGCGA TTGCCGCAGCGTGCGGTGCCGCCATCGCCATCGTCCCGTCCGCCTACTATGCGGCTCACGTCTTCTCCAAGGCGCCGGGG ACAGCGCCCCGCCAGGTGCTCCGTGCCTTCTACGTCGGAGAGGTCGTGAAGTTGATTCTCACGGCGGTGCTCTTTATTAT CGCGCTCCGATGGTTGAGCGGGCACTTTGTGCCGCTGATAACAACGTACGCAGCCGCCTTAGGCACCTACTGGTTCTTCT TCTTGGGGGCCCTCCGTACCTAG
Upstream 100 bases:
>100_bases GGTATCCTCGGACGTATCCATTGACTAAGCGGCCCTGATTTGACCCCCCTGATGCCGCCGTTTAGACTCCGCCCCTTATC GATGCCGTAGGGCGTACAGC
Downstream 100 bases:
>100_bases CGCATCCGCGCGGTACCAAACCGGGGAGCAACGTTTGCCATGAGCGCCGACAGCGAGTTCGACGCGACGGACTACATCCA GCACCACCTCACCAACCTTC
Product: ATP synthase I chain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MEVSEALNQDYEPQGMWRSRAPALRVVLGVLLAQAGVGAIAAGLWLLDGGWSAIAAACGAAIAIVPSAYYAAHVFSKAPG TAPRQVLRAFYVGEVVKLILTAVLFIIALRWLSGHFVPLITTYAAALGTYWFFFLGALRT
Sequences:
>Translated_140_residues MEVSEALNQDYEPQGMWRSRAPALRVVLGVLLAQAGVGAIAAGLWLLDGGWSAIAAACGAAIAIVPSAYYAAHVFSKAPG TAPRQVLRAFYVGEVVKLILTAVLFIIALRWLSGHFVPLITTYAAALGTYWFFFLGALRT >Mature_140_residues MEVSEALNQDYEPQGMWRSRAPALRVVLGVLLAQAGVGAIAAGLWLLDGGWSAIAAACGAAIAIVPSAYYAAHVFSKAPG TAPRQVLRAFYVGEVVKLILTAVLFIIALRWLSGHFVPLITTYAAALGTYWFFFLGALRT
Specific function: Unknown
COG id: COG3312
COG function: function code C; F0F1-type ATP synthase, subunit I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14925; Mature: 14925
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSEALNQDYEPQGMWRSRAPALRVVLGVLLAQAGVGAIAAGLWLLDGGWSAIAAACGA CCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH AIAIVPSAYYAAHVFSKAPGTAPRQVLRAFYVGEVVKLILTAVLFIIALRWLSGHFVPLI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TTYAAALGTYWFFFLGALRT HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVSEALNQDYEPQGMWRSRAPALRVVLGVLLAQAGVGAIAAGLWLLDGGWSAIAAACGA CCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH AIAIVPSAYYAAHVFSKAPGTAPRQVLRAFYVGEVVKLILTAVLFIIALRWLSGHFVPLI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TTYAAALGTYWFFFLGALRT HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA