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The map label for this gene is ychQ [C]

Identifier: 121999180

GI number: 121999180

Start: 2638329

End: 2638715

Strand: Reverse

Name: ychQ [C]

Synonym: Hhal_2402

Alternate gene names: 121999180

Gene position: 2638715-2638329 (Counterclockwise)

Preceding gene: 121999182

Following gene: 121999179

Centisome position: 98.52

GC content: 67.96

Gene sequence:

>387_bases
ATGCACCAGGTGCTGCTGTCGACGCACGTGCTGGCCGCCGTGGCCAGTCTCGGTCTGTTCATCGCCCGGGGGATCCTGAT
GTTCCGCGGTTCTGCGGCCCTGGATCACAAGGTCCTGCGCGTGGCGCCGCGGGTCGCCGACACCGTGCTGCTGCTCACAG
CGGTGGTGCTGATGGTGATGATCGCCCAGTACCCGTTCGTCGACGGCTGGCTCACCGTCAAGCTCCTCGGCCTGATCGCC
TACATCGCCCTCGGGGTGGTGGCCCTGGGGCGGAGCCGTCCCCGGCCGATCCGCATGGCCGCCTTTGTCGGCGGCATCGT
GGTGATCGGTTACCTGTACCTCTACAGCGTCACCCGCGAACCGCTGCTGATCGTCGGCCTGGGCTGA

Upstream 100 bases:

>100_bases
GCCGCACCACCCCGGTGCGTGGGCCCGGCGTGGTTGCAGGCGGCCCCGACCGGCAGGAAGAATAGCCGCTTTCTGATGCG
GACGATGCGAGGGGGTAGGA

Downstream 100 bases:

>100_bases
TCCGGAAGGCCCCGGGCACTGCTATAGTGTCCGGGGCAGCCAACGGAGCCGGATCATGCGTCTAACCCGCCACAGCGACT
ACGCCCTGCGGGTCCTGCTC

Product: invasion gene expression up-regulator SirB

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MHQVLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQYPFVDGWLTVKLLGLIA
YIALGVVALGRSRPRPIRMAAFVGGIVVIGYLYLYSVTREPLLIVGLG

Sequences:

>Translated_128_residues
MHQVLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQYPFVDGWLTVKLLGLIA
YIALGVVALGRSRPRPIRMAAFVGGIVVIGYLYLYSVTREPLLIVGLG
>Mature_128_residues
MHQVLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQYPFVDGWLTVKLLGLIA
YIALGVVALGRSRPRPIRMAAFVGGIVVIGYLYLYSVTREPLLIVGLG

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13751; Mature: 13751

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQVLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQYPFVDGWLTVKLLGLIAYIALGVVALGRSRPRPIRMAAFVGGIVVIGYLYLYSVTRE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PLLIVGLG
CEEEEECC
>Mature Secondary Structure
MHQVLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQYPFVDGWLTVKLLGLIAYIALGVVALGRSRPRPIRMAAFVGGIVVIGYLYLYSVTRE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PLLIVGLG
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA