| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is thiG
Identifier: 121999177
GI number: 121999177
Start: 2636566
End: 2637354
Strand: Reverse
Name: thiG
Synonym: Hhal_2399
Alternate gene names: 121999177
Gene position: 2637354-2636566 (Counterclockwise)
Preceding gene: 121999178
Following gene: 121999176
Centisome position: 98.47
GC content: 68.19
Gene sequence:
>789_bases ATGGCGGATCGCGATCCCCTGGTCATCGCCGGGCGTGAGTACCACTCGCGTCTGCTGGTCGGTACCGGCAAGTACCGTGA TATGGAGCAGACCCGCGCGGCCATCGAGGCGAGCGGTGCAGAGATCGTCACCATCGCCCTGCGTCGCAGCAACATCGGCC AGAATCCCGACGAGCCGAACCTGCTCGACGCCGTACCGCCGGATCGCTACACCATCCTGCCCAATACCGCCGGCTGCTAT ACGGTCAAGGATGCGGTGCGCACCTGCCGGTTGGGCCGCGAGCTGCTTGACGGCCACAACCTGGTCAAGCTCGAGGTCAT CGGCGACGAGCGCACCCTCTACCCGGATGTGCCCGGGACCCTGGAGGCCGCCGAGCAGCTGGTGGCCGAGGGCTTCGAGG TCATGGCCTATACCAGCGACGACCCCATCACCGCCAAACGGCTCGAAGAGATCGGCTGCGTGGCCGTGATGCCGCTGGCC GCCCCCATCGGTTCGGGGCTCGGGATCCAGAACCGCTACAACATCCTGGAGATCGTCGACCGCCTGGAGGTCCCGGTCCT GGTGGACGCCGGGGTGGGGACCGCCTCCGACGTGGCCGTGGCCATGGAGCTCGGCTGTGACGCCGTGTTGCTCAATACGG CCATCGCCGGTGCGCGGGATCCGGTGCTCATGGCCTCGGCCATGCGCAAGGGCGTCGAGGCCGGGCGCGAGGCGTACCGT GCCGGTCGCATCCCCAAGAAGCGCTACGCCGCGGCGTCGTCGCCCGAGGAAGGGACCTTCTTCGAGTGA
Upstream 100 bases:
>100_bases CGGCGACCACCAACTGGCCGATGGCGATCGCGTGGAGGTCATCCAGGCCATCGGCGGCGGCTGACCCGAGTCCCGAAACA GCACGGAGTCCAAGAGAAAG
Downstream 100 bases:
>100_bases GCCAGCCGCGACAGACCCGCACATTCGTCCGCCGCGAGGGGCGCCTGACCCAGGGCCAGCAGCGGGCCCTGGAGGGGCTC TGGCCGCAATTCGGGGTCGA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MADRDPLVIAGREYHSRLLVGTGKYRDMEQTRAAIEASGAEIVTIALRRSNIGQNPDEPNLLDAVPPDRYTILPNTAGCY TVKDAVRTCRLGRELLDGHNLVKLEVIGDERTLYPDVPGTLEAAEQLVAEGFEVMAYTSDDPITAKRLEEIGCVAVMPLA APIGSGLGIQNRYNILEIVDRLEVPVLVDAGVGTASDVAVAMELGCDAVLLNTAIAGARDPVLMASAMRKGVEAGREAYR AGRIPKKRYAAASSPEEGTFFE
Sequences:
>Translated_262_residues MADRDPLVIAGREYHSRLLVGTGKYRDMEQTRAAIEASGAEIVTIALRRSNIGQNPDEPNLLDAVPPDRYTILPNTAGCY TVKDAVRTCRLGRELLDGHNLVKLEVIGDERTLYPDVPGTLEAAEQLVAEGFEVMAYTSDDPITAKRLEEIGCVAVMPLA APIGSGLGIQNRYNILEIVDRLEVPVLVDAGVGTASDVAVAMELGCDAVLLNTAIAGARDPVLMASAMRKGVEAGREAYR AGRIPKKRYAAASSPEEGTFFE >Mature_261_residues ADRDPLVIAGREYHSRLLVGTGKYRDMEQTRAAIEASGAEIVTIALRRSNIGQNPDEPNLLDAVPPDRYTILPNTAGCYT VKDAVRTCRLGRELLDGHNLVKLEVIGDERTLYPDVPGTLEAAEQLVAEGFEVMAYTSDDPITAKRLEEIGCVAVMPLAA PIGSGLGIQNRYNILEIVDRLEVPVLVDAGVGTASDVAVAMELGCDAVLLNTAIAGARDPVLMASAMRKGVEAGREAYRA GRIPKKRYAAASSPEEGTFFE
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=256, Percent_Identity=46.484375, Blast_Score=206, Evalue=9e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 28124; Mature: 27993
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRDPLVIAGREYHSRLLVGTGKYRDMEQTRAAIEASGAEIVTIALRRSNIGQNPDEPN CCCCCCEEEECCHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC LLDAVPPDRYTILPNTAGCYTVKDAVRTCRLGRELLDGHNLVKLEVIGDERTLYPDVPGT CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCH LEAAEQLVAEGFEVMAYTSDDPITAKRLEEIGCVAVMPLAAPIGSGLGIQNRYNILEIVD HHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEHHHHHCCCCCCCCCCHHHHHHHH RLEVPVLVDAGVGTASDVAVAMELGCDAVLLNTAIAGARDPVLMASAMRKGVEAGREAYR HCCCCEEEECCCCCHHHHHHHHHHCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AGRIPKKRYAAASSPEEGTFFE HCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure ADRDPLVIAGREYHSRLLVGTGKYRDMEQTRAAIEASGAEIVTIALRRSNIGQNPDEPN CCCCCEEEECCHHCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC LLDAVPPDRYTILPNTAGCYTVKDAVRTCRLGRELLDGHNLVKLEVIGDERTLYPDVPGT CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCH LEAAEQLVAEGFEVMAYTSDDPITAKRLEEIGCVAVMPLAAPIGSGLGIQNRYNILEIVD HHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEHHHHHCCCCCCCCCCHHHHHHHH RLEVPVLVDAGVGTASDVAVAMELGCDAVLLNTAIAGARDPVLMASAMRKGVEAGREAYR HCCCCEEEECCCCCHHHHHHHHHHCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AGRIPKKRYAAASSPEEGTFFE HCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA