| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is cutA [H]
Identifier: 121999117
GI number: 121999117
Start: 2565191
End: 2565511
Strand: Reverse
Name: cutA [H]
Synonym: Hhal_2339
Alternate gene names: 121999117
Gene position: 2565511-2565191 (Counterclockwise)
Preceding gene: 121999122
Following gene: 121999116
Centisome position: 95.78
GC content: 64.8
Gene sequence:
>321_bases ATGTCGAGTAAGGAGCTGGTCGTCCTGTGCACCTGCCCCGACGGGGAGACCGCCCGCCGGCTGGCCGGCGAGGTGGTGGA GGCCCGGCTCGCCGCCTGCGTCAACATCGTCCCGGGGGTGACCTCGGTCTTCTACTGGGAGGGGGAGGCGCAGGCCGAGA CGGAGTGCCTCTTGGTGATCAAGACGTCGGATTTTGCCTACACCCGATTGGAGGGGCTGCTTGTGGAGCGGCATCCCTAT GAACTTCCGGAGGTGATCGCGGTCGGCATCGAAAAGGGCCTGTCAGGGTTCCTGGACTGGATACGTGAAGAAACCCGGTA G
Upstream 100 bases:
>100_bases TTCCGGCACCCGCCCGGGTGACGTTCCCTGCCGGTTCTAAGTGGATGAGGACGGCGGTGGTAGAATTCAACCCCTGCAAG CCACCCAAGGAGGTTCAGCG
Downstream 100 bases:
>100_bases GAGGGCATGACTCGATGACGGGCAGGATGCGATTCGACCGAGGTGGCCTGGTCGCCGCGCTGTGGCTGGCGTTGGGTCTG CTGGTGGCGGCCACCCCGGC
Product: CutA1 divalent ion tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSSKELVVLCTCPDGETARRLAGEVVEARLAACVNIVPGVTSVFYWEGEAQAETECLLVIKTSDFAYTRLEGLLVERHPY ELPEVIAVGIEKGLSGFLDWIREETR
Sequences:
>Translated_106_residues MSSKELVVLCTCPDGETARRLAGEVVEARLAACVNIVPGVTSVFYWEGEAQAETECLLVIKTSDFAYTRLEGLLVERHPY ELPEVIAVGIEKGLSGFLDWIREETR >Mature_105_residues SSKELVVLCTCPDGETARRLAGEVVEARLAACVNIVPGVTSVFYWEGEAQAETECLLVIKTSDFAYTRLEGLLVERHPYE LPEVIAVGIEKGLSGFLDWIREETR
Specific function: Involved in resistance toward heavy metals [H]
COG id: COG1324
COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutA family [H]
Homologues:
Organism=Homo sapiens, GI62198241, Length=97, Percent_Identity=41.2371134020619, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI62526024, Length=97, Percent_Identity=41.2371134020619, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI62526022, Length=97, Percent_Identity=41.2371134020619, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI7706244, Length=97, Percent_Identity=41.2371134020619, Blast_Score=91, Evalue=2e-19, Organism=Homo sapiens, GI62526026, Length=97, Percent_Identity=41.2371134020619, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790579, Length=105, Percent_Identity=37.1428571428571, Blast_Score=90, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32565476, Length=103, Percent_Identity=33.0097087378641, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641937, Length=103, Percent_Identity=44.6601941747573, Blast_Score=93, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004323 - InterPro: IPR011322 [H]
Pfam domain/function: PF03091 CutA1 [H]
EC number: NA
Molecular weight: Translated: 11746; Mature: 11614
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKELVVLCTCPDGETARRLAGEVVEARLAACVNIVPGVTSVFYWEGEAQAETECLLVI CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE KTSDFAYTRLEGLLVERHPYELPEVIAVGIEKGLSGFLDWIREETR EECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSKELVVLCTCPDGETARRLAGEVVEARLAACVNIVPGVTSVFYWEGEAQAETECLLVI CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE KTSDFAYTRLEGLLVERHPYELPEVIAVGIEKGLSGFLDWIREETR EECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA