Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121999031

Identifier: 121999031

GI number: 121999031

Start: 2472416

End: 2473045

Strand: Reverse

Name: 121999031

Synonym: Hhal_2252

Alternate gene names: NA

Gene position: 2473045-2472416 (Counterclockwise)

Preceding gene: 121999032

Following gene: 121999028

Centisome position: 92.33

GC content: 67.62

Gene sequence:

>630_bases
ATGGGACGCAGAGGAGCCAACCATCAACGCGATGAGCGCATGCGCTTGAGTCTGATTCGCGAGGCGGCGCGGCTGATGGC
CGAGGACGGGGTGCGCGACTACTTCGCCGCCAAGCGGAAGGCCGCGGAGCGCCTCGGTGCCAGCAATACCCGCAACCTCC
CCGGCAATCAGGAGATCCACGACGCGCTGCTGGAGTATCGTGCCGTCTTCGGCGGCGAAGAGCATGAGGCGGCGCTGCGC
CACCTGCGCCAGCGCGCCCTGGAGGCCATGTCGTTCTTTGCTGATTTTCGCCCGCGGTTGGTGGGGCCGGTGCTCTCCGG
CACCGCGGATACTGAATCGCCGGTGCAGTTGCACCTGTTTGCCGATACCCCCGAGACGGTCTTGATGTTCCTTATGGACC
GGCGGATCCCCTTCGAGTCCGATGAGCGGCGCTTGCGCTTCGGCCGCGACGGCTGGTCCATCCAGCCCATGTTCCGGTTC
CTGGCCGGGGATACCGAGGTGGAACTGACGGTCTTCTCGGAGGCCGGGCTACGGGAGCCGCCGCGCAGCGAGGTGCATGG
AGGGGCGATGGAGCGCGCCGGGGTGGCGGAGGTCTCCGCCTTGCTGGAGGAGGCGGTGGGAGAGGAGTAG

Upstream 100 bases:

>100_bases
TCCGTGACGACAGCGATCGCCGGCAGCGTGGTGATGAGCACACGGAGCGGGAACTCTTCTAGGCGGGTGCCAACAGACTG
CCGGAGCAGGGGGAGGAGCT

Downstream 100 bases:

>100_bases
CAACGCCCCGGGGCCGTCGGGTGCTCCCGCCCCGGTGTCTGCGGCGGCGCGGCCCCGGGGAACGGCCCGGAGTGCGCCCT
CGGGGCGGGTCTTAACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGRRGANHQRDERMRLSLIREAARLMAEDGVRDYFAAKRKAAERLGASNTRNLPGNQEIHDALLEYRAVFGGEEHEAALR
HLRQRALEAMSFFADFRPRLVGPVLSGTADTESPVQLHLFADTPETVLMFLMDRRIPFESDERRLRFGRDGWSIQPMFRF
LAGDTEVELTVFSEAGLREPPRSEVHGGAMERAGVAEVSALLEEAVGEE

Sequences:

>Translated_209_residues
MGRRGANHQRDERMRLSLIREAARLMAEDGVRDYFAAKRKAAERLGASNTRNLPGNQEIHDALLEYRAVFGGEEHEAALR
HLRQRALEAMSFFADFRPRLVGPVLSGTADTESPVQLHLFADTPETVLMFLMDRRIPFESDERRLRFGRDGWSIQPMFRF
LAGDTEVELTVFSEAGLREPPRSEVHGGAMERAGVAEVSALLEEAVGEE
>Mature_208_residues
GRRGANHQRDERMRLSLIREAARLMAEDGVRDYFAAKRKAAERLGASNTRNLPGNQEIHDALLEYRAVFGGEEHEAALRH
LRQRALEAMSFFADFRPRLVGPVLSGTADTESPVQLHLFADTPETVLMFLMDRRIPFESDERRLRFGRDGWSIQPMFRFL
AGDTEVELTVFSEAGLREPPRSEVHGGAMERAGVAEVSALLEEAVGEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23565; Mature: 23434

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRGANHQRDERMRLSLIREAARLMAEDGVRDYFAAKRKAAERLGASNTRNLPGNQEIH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DALLEYRAVFGGEEHEAALRHLRQRALEAMSFFADFRPRLVGPVLSGTADTESPVQLHLF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADTPETVLMFLMDRRIPFESDERRLRFGRDGWSIQPMFRFLAGDTEVELTVFSEAGLREP
CCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
PRSEVHGGAMERAGVAEVSALLEEAVGEE
CHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRRGANHQRDERMRLSLIREAARLMAEDGVRDYFAAKRKAAERLGASNTRNLPGNQEIH
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DALLEYRAVFGGEEHEAALRHLRQRALEAMSFFADFRPRLVGPVLSGTADTESPVQLHLF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADTPETVLMFLMDRRIPFESDERRLRFGRDGWSIQPMFRFLAGDTEVELTVFSEAGLREP
CCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC
PRSEVHGGAMERAGVAEVSALLEEAVGEE
CHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA