Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121999027

Identifier: 121999027

GI number: 121999027

Start: 2469131

End: 2469874

Strand: Reverse

Name: 121999027

Synonym: Hhal_2248

Alternate gene names: NA

Gene position: 2469874-2469131 (Counterclockwise)

Preceding gene: 121999028

Following gene: 121999026

Centisome position: 92.21

GC content: 71.1

Gene sequence:

>744_bases
ATGTTTCAGGCGCCCGTATCCCGGTTGGCGACAGCGTCCGTCCTGCTTGCAGCCTGCGGGGCTGCGGCGGCCGCGCTGGC
CGGCCCGTTGTACCGTATCCATACCGTCGAACTCGATTCGGCCCTGATGATGATCGCCGCCGGTTTCGTCGCCGGGGCCC
TCGCCCTCATCCCCGGTGGGGTCGGGCTGGTCGCCACCTTCGGTCTGCACGGCAAGCGGGGGCGGGGTCGGGCCCTGGCT
GGACTGGCTCTGGGGCTGGGAGTGGTGGTGGTCGCCGGGCCGAAGGTCTATGGCGCCGTCCTCGGGCCGAACCTCCACGA
CCTCGTCACCACCGAAGACGACCCGCCGTCATTCCGTGCCCTGGCACCGGCCCGTGAACGCGCCGGCAGCGCCGTGGACT
ATCCCGGCGGGGCGGTGGCCGAGCGCCAGGCCGAAGCGCACCCCGAGCTCACCGGTCGGGACTACCCCCACGACGTCTCC
GAGATCCTTAGTGCCGCCGAGAGCGCCGCGCTGGGCCTGGAGTGGACGGTGGCGCGCACCGACATGCAGGGCGAGCTGGA
GGCCACAGCGCGCAGCTACTGGCTGGGCATCGTCCACGACATCGTCATCCGGGTCGAGGATGACGGGGATCATCGTCGGG
TCGATGCGCGCGCGGCCACGCGCGGCGGCGAGGCGGATGTCGGTGATAACGCACGCCTGGTCAGCGACTTCTACGAGGAG
CTCGAGGCGCAGCTGGAACGCTGA

Upstream 100 bases:

>100_bases
GCGGCGTCCGCTTGGGCGCTGCCCCGCCCTCGTCGCCTGGAACGTTTTGCCTCGGCCGTCTCCGGCCGCATAATTGGCCG
GAAATCCGGCAGGAGGGGTC

Downstream 100 bases:

>100_bases
GCGGGGCGGCGTACGGCGGATGATCAGGCTGACTTGGATGCGTTACTATCGCGGCTTATCCGCGGATCGCGAAGCTGAAT
AGGGAGACTTCCATGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFQAPVSRLATASVLLAACGAAAAALAGPLYRIHTVELDSALMMIAAGFVAGALALIPGGVGLVATFGLHGKRGRGRALA
GLALGLGVVVVAGPKVYGAVLGPNLHDLVTTEDDPPSFRALAPARERAGSAVDYPGGAVAERQAEAHPELTGRDYPHDVS
EILSAAESAALGLEWTVARTDMQGELEATARSYWLGIVHDIVIRVEDDGDHRRVDARAATRGGEADVGDNARLVSDFYEE
LEAQLER

Sequences:

>Translated_247_residues
MFQAPVSRLATASVLLAACGAAAAALAGPLYRIHTVELDSALMMIAAGFVAGALALIPGGVGLVATFGLHGKRGRGRALA
GLALGLGVVVVAGPKVYGAVLGPNLHDLVTTEDDPPSFRALAPARERAGSAVDYPGGAVAERQAEAHPELTGRDYPHDVS
EILSAAESAALGLEWTVARTDMQGELEATARSYWLGIVHDIVIRVEDDGDHRRVDARAATRGGEADVGDNARLVSDFYEE
LEAQLER
>Mature_247_residues
MFQAPVSRLATASVLLAACGAAAAALAGPLYRIHTVELDSALMMIAAGFVAGALALIPGGVGLVATFGLHGKRGRGRALA
GLALGLGVVVVAGPKVYGAVLGPNLHDLVTTEDDPPSFRALAPARERAGSAVDYPGGAVAERQAEAHPELTGRDYPHDVS
EILSAAESAALGLEWTVARTDMQGELEATARSYWLGIVHDIVIRVEDDGDHRRVDARAATRGGEADVGDNARLVSDFYEE
LEAQLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25681; Mature: 25681

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQAPVSRLATASVLLAACGAAAAALAGPLYRIHTVELDSALMMIAAGFVAGALALIPGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCC
VGLVATFGLHGKRGRGRALAGLALGLGVVVVAGPKVYGAVLGPNLHDLVTTEDDPPSFRA
HHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCHHEEHHCCCCHHHCEECCCCCCCHHH
LAPARERAGSAVDYPGGAVAERQAEAHPELTGRDYPHDVSEILSAAESAALGLEWTVART
CCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
DMQGELEATARSYWLGIVHDIVIRVEDDGDHRRVDARAATRGGEADVGDNARLVSDFYEE
CCCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEECHHHHCCCCCCCCCCCHHHHHHHHHH
LEAQLER
HHHHHCC
>Mature Secondary Structure
MFQAPVSRLATASVLLAACGAAAAALAGPLYRIHTVELDSALMMIAAGFVAGALALIPGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCC
VGLVATFGLHGKRGRGRALAGLALGLGVVVVAGPKVYGAVLGPNLHDLVTTEDDPPSFRA
HHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCHHEEHHCCCCHHHCEECCCCCCCHHH
LAPARERAGSAVDYPGGAVAERQAEAHPELTGRDYPHDVSEILSAAESAALGLEWTVART
CCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
DMQGELEATARSYWLGIVHDIVIRVEDDGDHRRVDARAATRGGEADVGDNARLVSDFYEE
CCCCHHHHHHHHHHHHHHEEEEEEECCCCCCEEECHHHHCCCCCCCCCCCHHHHHHHHHH
LEAQLER
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA