| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is gtaB1 [H]
Identifier: 121998974
GI number: 121998974
Start: 2406803
End: 2407696
Strand: Reverse
Name: gtaB1 [H]
Synonym: Hhal_2195
Alternate gene names: 121998974
Gene position: 2407696-2406803 (Counterclockwise)
Preceding gene: 121998975
Following gene: 121998973
Centisome position: 89.89
GC content: 68.34
Gene sequence:
>894_bases TTGAGCGCCAACTACCCCATCCGAACCGTCGTCTTCCCGGTGGCCGGGCTCGGCACTCGCTTCCTGCCGGCCACCAAGGC CAGTCCCAAGGAGATGCTGCCGGTCGTCGACAAGCCGCTGATCCAGTACGCCGTGGAAGAGGCCGTGGCCGCCGGCGCCG AGTACCTGGTCTTCGTCACCGGTCGCACCAAGCGCGCCATCGAGGACCACTTCGATACCGCCACCGAACTGGAGCGGGAA CTCGAGGCCAAGGGCAAGGAGAAGCTCCTCCGGTTGGTCAAGGACACCGTGCCCAAGGGGGTCAGCTGTATCTACATCCG CCAGGGCGAGGCCCTGGGGCTGGGGCACGCCGTCGCCTGTGCCCGTCCGGCGGTCGGCCGCCGTGAACCGTTCGGCGTCA TTCTCGCCGACGACCTGATCAACGCCGGTGACGGTGCCCCGGCGCTGGCCCAGATGGCCGAGGTGGCCGCCGCCCGCGGT GGTTCGGTGCTCGGTGTCGAGCGCGTTCCGCAGGCCGAGACGGACAAGTACGGCGTCGTCGAGGGCGAGACCGTGGCCGA CGGGGTGACCGCCGTGCGCGGCATGGTCGAGAAGCCCAGCCCCGCTGAGGCCCCGTCGAATCTGGCGGTGGTCGGACGCT ACATCCTGTCACGCAACATCTTCGACCACCTCGACCGGACCGAGCCCGACCACCGGGGGGAGATCCAGCTCACCGATGCC ATCGTCTCCCTGATGGCGGAAGAGTCGGTGTACGCTTACGAGTACGCCGGCGAACGCTACGACTGCGGCAGTAAGCTCGG CTACCTGCAGGCCACGGTGGCCTACGGACTCGAACATCCGGAACTCGGCCCGGCCTTCCGGGACTATCTCAAAGGGCTGG ACACCGGCGCCTGA
Upstream 100 bases:
>100_bases TGGCTGAGATCGGCCCCTACCTTACCCGGTAGGGCCGTCGGCCGGATCGCCGCCGGCCGGCGGCACAGGGAATGACCGAA CAACGTCAGGAGGTCGTATC
Downstream 100 bases:
>100_bases GCGGCGCCGCCCGGCCAACAGGAGGACGCCATGGCCCGCGCTGTCCGCATCCATCAAACGGGTGGCCCCGAGCAACTCCA GGTCGAGGAGATCGACGTGC
Product: UTP-glucose-1-phosphate uridylyltransferase GalU
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase 1; UDP-glucose pyrophosphorylase 1; UDPGP 1; Uridine diphosphoglucose pyrophosphorylase 1 [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSANYPIRTVVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAVAAGAEYLVFVTGRTKRAIEDHFDTATELERE LEAKGKEKLLRLVKDTVPKGVSCIYIRQGEALGLGHAVACARPAVGRREPFGVILADDLINAGDGAPALAQMAEVAAARG GSVLGVERVPQAETDKYGVVEGETVADGVTAVRGMVEKPSPAEAPSNLAVVGRYILSRNIFDHLDRTEPDHRGEIQLTDA IVSLMAEESVYAYEYAGERYDCGSKLGYLQATVAYGLEHPELGPAFRDYLKGLDTGA
Sequences:
>Translated_297_residues MSANYPIRTVVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAVAAGAEYLVFVTGRTKRAIEDHFDTATELERE LEAKGKEKLLRLVKDTVPKGVSCIYIRQGEALGLGHAVACARPAVGRREPFGVILADDLINAGDGAPALAQMAEVAAARG GSVLGVERVPQAETDKYGVVEGETVADGVTAVRGMVEKPSPAEAPSNLAVVGRYILSRNIFDHLDRTEPDHRGEIQLTDA IVSLMAEESVYAYEYAGERYDCGSKLGYLQATVAYGLEHPELGPAFRDYLKGLDTGA >Mature_296_residues SANYPIRTVVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAVAAGAEYLVFVTGRTKRAIEDHFDTATELEREL EAKGKEKLLRLVKDTVPKGVSCIYIRQGEALGLGHAVACARPAVGRREPFGVILADDLINAGDGAPALAQMAEVAAARGG SVLGVERVPQAETDKYGVVEGETVADGVTAVRGMVEKPSPAEAPSNLAVVGRYILSRNIFDHLDRTEPDHRGEIQLTDAI VSLMAEESVYAYEYAGERYDCGSKLGYLQATVAYGLEHPELGPAFRDYLKGLDTGA
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=294, Percent_Identity=49.3197278911565, Blast_Score=250, Evalue=6e-68, Organism=Escherichia coli, GI1788355, Length=290, Percent_Identity=45.5172413793103, Blast_Score=235, Evalue=2e-63, Organism=Escherichia coli, GI1790224, Length=224, Percent_Identity=26.7857142857143, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31818; Mature: 31686
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANYPIRTVVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAVAAGAEYLVFVT CCCCCCHHEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE GRTKRAIEDHFDTATELERELEAKGKEKLLRLVKDTVPKGVSCIYIRQGEALGLGHAVAC CCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH ARPAVGRREPFGVILADDLINAGDGAPALAQMAEVAAARGGSVLGVERVPQAETDKYGVV CCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC EGETVADGVTAVRGMVEKPSPAEAPSNLAVVGRYILSRNIFDHLDRTEPDHRGEIQLTDA CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH IVSLMAEESVYAYEYAGERYDCGSKLGYLQATVAYGLEHPELGPAFRDYLKGLDTGA HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SANYPIRTVVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAVAAGAEYLVFVT CCCCCHHEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE GRTKRAIEDHFDTATELERELEAKGKEKLLRLVKDTVPKGVSCIYIRQGEALGLGHAVAC CCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH ARPAVGRREPFGVILADDLINAGDGAPALAQMAEVAAARGGSVLGVERVPQAETDKYGVV CCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC EGETVADGVTAVRGMVEKPSPAEAPSNLAVVGRYILSRNIFDHLDRTEPDHRGEIQLTDA CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH IVSLMAEESVYAYEYAGERYDCGSKLGYLQATVAYGLEHPELGPAFRDYLKGLDTGA HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA