| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is cheB1 [H]
Identifier: 121998939
GI number: 121998939
Start: 2372528
End: 2373577
Strand: Reverse
Name: cheB1 [H]
Synonym: Hhal_2160
Alternate gene names: 121998939
Gene position: 2373577-2372528 (Counterclockwise)
Preceding gene: 121998940
Following gene: 121998938
Centisome position: 88.62
GC content: 69.71
Gene sequence:
>1050_bases ATGATCCGGGTCCTGATTGTCGACGACTCCGCGCTGATCCGGCGGCTGCTGGCCGAGCTGTTCGCAGCGGAAGAGGGCAT CGAGGTTGTGGGGACGGCCCGGGACCCCTACGACGCCCGTGAGAAGATCAAGCAGCTCAATCCCGATGTCCTGACCCTCG ACGTCGAGATGCCGCGCATGGACGGCATCACCTTCCTGCGCAATCTGATGCGGCTGCGCCCCATGCCGGTGGTCATGGTC TCTTCGCTGACCGAGGTCGGCGCCGAGGAGACCCTGGAGGCGCTCGCGCTGGGCGCCGTGGACTTCGTCACCAAGCCGAA AGCCGATGTCAGCTATGCGCTGGAGGGGTATCGGGACGAGATCGTGGCCAAGGTGCGCGCCGCGGCGCAGGCGCGGGTCC GGCCCGGCCCCGCACGAAGCGCGGCCGCAGCCCCGCCTCGCCCCCACCAGCGCACCACAGATAAGGTCGTGGCCATCGGC GCCTCCACCGGTGGCACCGTGGCGGTGCAGCGGCTGCTCGAAGTGATGCCGCCCAACGCGCCGGCCACGGTGATCACCCA GCACATGCCGCCGGGGTTCTCGGCGGCCTTCGCCCAGCGGCTCGATCACCTCTGCGCGGTCTCGGTACACGAGGCGCAGG ACGGACAGCGGGTGTTGCCCGGGCACGTCTACATCGCGCCCGGCGGGTACCACCTGGAGTTGCACCGGGACGGTAGCAAG TACATTTGCCGGGTCACGGAGGGGGAACTGGTCAACCGCCACCGGCCTTCCGTAGATGTGCTGTTCAACTCGGTGGCCAC CTCGGCCCGTGCTAACGCCGTGGGCGTGCTGCTCACCGGCATGGGCAGCGACGGAGCCGTTGGCTTGGGGCGCATGCAGG CAGCGGGAGCGGTTACCATCGCCCAGGATGAGGCGAGCAGTGTCGTATGGGGGATGCCGGGCGCTGCCGTCAAGGCCGGC CACGCGGACCAGGTCCTGCCGCTGGAGCGGATCGCCGAGGCGATCCAGGCGGCGGTGGCGCCGCCCTCCCAACCCACCCA GGAGAGGTGA
Upstream 100 bases:
>100_bases GCAACGACACCGTCGTGCGCCGCGAGGAGCACTACCTCCACGAGATCGACGAGCAGCCGGTCTCCGGCGACGTCGACCTG TTTTGAGGACGCAGCGCGGT
Downstream 100 bases:
>100_bases ATATGGTCGAGGTTGCCGAGGATCGCGACGGCGAGTCCATCGTCTACCACCCGAAGACGGCGTGGCTGCGCCACTATGGT GCCCCGTCGGTGTTGACCGC
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MIRVLIVDDSALIRRLLAELFAAEEGIEVVGTARDPYDAREKIKQLNPDVLTLDVEMPRMDGITFLRNLMRLRPMPVVMV SSLTEVGAEETLEALALGAVDFVTKPKADVSYALEGYRDEIVAKVRAAAQARVRPGPARSAAAAPPRPHQRTTDKVVAIG ASTGGTVAVQRLLEVMPPNAPATVITQHMPPGFSAAFAQRLDHLCAVSVHEAQDGQRVLPGHVYIAPGGYHLELHRDGSK YICRVTEGELVNRHRPSVDVLFNSVATSARANAVGVLLTGMGSDGAVGLGRMQAAGAVTIAQDEASSVVWGMPGAAVKAG HADQVLPLERIAEAIQAAVAPPSQPTQER
Sequences:
>Translated_349_residues MIRVLIVDDSALIRRLLAELFAAEEGIEVVGTARDPYDAREKIKQLNPDVLTLDVEMPRMDGITFLRNLMRLRPMPVVMV SSLTEVGAEETLEALALGAVDFVTKPKADVSYALEGYRDEIVAKVRAAAQARVRPGPARSAAAAPPRPHQRTTDKVVAIG ASTGGTVAVQRLLEVMPPNAPATVITQHMPPGFSAAFAQRLDHLCAVSVHEAQDGQRVLPGHVYIAPGGYHLELHRDGSK YICRVTEGELVNRHRPSVDVLFNSVATSARANAVGVLLTGMGSDGAVGLGRMQAAGAVTIAQDEASSVVWGMPGAAVKAG HADQVLPLERIAEAIQAAVAPPSQPTQER >Mature_349_residues MIRVLIVDDSALIRRLLAELFAAEEGIEVVGTARDPYDAREKIKQLNPDVLTLDVEMPRMDGITFLRNLMRLRPMPVVMV SSLTEVGAEETLEALALGAVDFVTKPKADVSYALEGYRDEIVAKVRAAAQARVRPGPARSAAAAPPRPHQRTTDKVVAIG ASTGGTVAVQRLLEVMPPNAPATVITQHMPPGFSAAFAQRLDHLCAVSVHEAQDGQRVLPGHVYIAPGGYHLELHRDGSK YICRVTEGELVNRHRPSVDVLFNSVATSARANAVGVLLTGMGSDGAVGLGRMQAAGAVTIAQDEASSVVWGMPGAAVKAG HADQVLPLERIAEAIQAAVAPPSQPTQER
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=342, Percent_Identity=54.3859649122807, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=38.0952380952381, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 37078; Mature: 37078
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVLIVDDSALIRRLLAELFAAEEGIEVVGTARDPYDAREKIKQLNPDVLTLDVEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCC DGITFLRNLMRLRPMPVVMVSSLTEVGAEETLEALALGAVDFVTKPKADVSYALEGYRDE CCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IVAKVRAAAQARVRPGPARSAAAAPPRPHQRTTDKVVAIGASTGGTVAVQRLLEVMPPNA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCC PATVITQHMPPGFSAAFAQRLDHLCAVSVHEAQDGQRVLPGHVYIAPGGYHLELHRDGSK CCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCCEEEEECCCEEEEEEECCCE YICRVTEGELVNRHRPSVDVLFNSVATSARANAVGVLLTGMGSDGAVGLGRMQAAGAVTI EEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCEEEE AQDEASSVVWGMPGAAVKAGHADQVLPLERIAEAIQAAVAPPSQPTQER ECCCCCCEEECCCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIRVLIVDDSALIRRLLAELFAAEEGIEVVGTARDPYDAREKIKQLNPDVLTLDVEMPRM CEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCC DGITFLRNLMRLRPMPVVMVSSLTEVGAEETLEALALGAVDFVTKPKADVSYALEGYRDE CCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IVAKVRAAAQARVRPGPARSAAAAPPRPHQRTTDKVVAIGASTGGTVAVQRLLEVMPPNA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCC PATVITQHMPPGFSAAFAQRLDHLCAVSVHEAQDGQRVLPGHVYIAPGGYHLELHRDGSK CCEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCCEEEEECCCEEEEEEECCCE YICRVTEGELVNRHRPSVDVLFNSVATSARANAVGVLLTGMGSDGAVGLGRMQAAGAVTI EEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHCCEEEE AQDEASSVVWGMPGAAVKAGHADQVLPLERIAEAIQAAVAPPSQPTQER ECCCCCCEEECCCCHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]