Click here to switch to the map view.

The map label for this gene is 121998937

Identifier: 121998937

GI number: 121998937

Start: 2370858

End: 2371163

Strand: Reverse

Name: 121998937

Synonym: Hhal_2158

Alternate gene names: NA

Gene position: 2371163-2370858 (Counterclockwise)

Preceding gene: 121998938

Following gene: 121998936

Centisome position: 88.53

GC content: 59.15

Gene sequence:

>306_bases
ATGGGCATCGAAACCCAACGCGAGAACGACGGCCAGACCCTGGTGATGTCAATCCAGGGTTTTTTCGACTTCAGTCTGCA
TAAGGATTTCCGGCAGGCGTACAAGGGGGTGGAGGGTGTCCGTCGCTACGTCATCGACCTGTCCCAGACCGAGTACATGG
ACAGCTCCGCCCTCGGTATGCTGTTGCTGCTAAGGGAGTCGGCCAGCGATCAGGGCGCCGAGGTTGCCCTGCGTAACTGC
TCCCGGGAGGTGCGTAAGATCCTCGAGATCGCCAACTTCCAGCGCCTGTTTACCATCGAGGAGTGA

Upstream 100 bases:

>100_bases
CACGCGGGCCTTGGGGCGGGGCGCGTCGGCGGCAGTGGCCTGCCGCCGGTATTCGAGCGTAATCATCGCTCAACAGTCAG
TCATACAGGAGCGAGGAACG

Downstream 100 bases:

>100_bases
CCCCCATGGGCCGCGCGGGCGTTTCGGAGCAGAGCACACGTCGTGGATAGAGTGGCCGACCAATCACTGCCTACCTTCCT
GGTCGTCGATGATGAGCCGG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Sigma Factor Antagonist; Anti-Anti-Sigma Regulatory Factor; Anti-Sigma F Factor Antagonist; STAS Domain-Containing Protein; Anti Sigma Factor Antagonist; Anti-Sigma Factor Antagonist Family Protein; Sulfate Transporter/Antisigma-Factor Antagonist STAS; Anti-Sigma-Factor Antagonist Domain-Containing Protein; Antisigma-Factor Antagonist STAS Domain Protein; Anti-Anti-Sigma Factor; STAS Domain Protein; Flagellar Basal-Body Rod Protein FlgB

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MGIETQRENDGQTLVMSIQGFFDFSLHKDFRQAYKGVEGVRRYVIDLSQTEYMDSSALGMLLLLRESASDQGAEVALRNC
SREVRKILEIANFQRLFTIEE

Sequences:

>Translated_101_residues
MGIETQRENDGQTLVMSIQGFFDFSLHKDFRQAYKGVEGVRRYVIDLSQTEYMDSSALGMLLLLRESASDQGAEVALRNC
SREVRKILEIANFQRLFTIEE
>Mature_100_residues
GIETQRENDGQTLVMSIQGFFDFSLHKDFRQAYKGVEGVRRYVIDLSQTEYMDSSALGMLLLLRESASDQGAEVALRNCS
REVRKILEIANFQRLFTIEE

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11612; Mature: 11481

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIETQRENDGQTLVMSIQGFFDFSLHKDFRQAYKGVEGVRRYVIDLSQTEYMDSSALGM
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHH
LLLLRESASDQGAEVALRNCSREVRKILEIANFQRLFTIEE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEECC
>Mature Secondary Structure 
GIETQRENDGQTLVMSIQGFFDFSLHKDFRQAYKGVEGVRRYVIDLSQTEYMDSSALGM
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHH
LLLLRESASDQGAEVALRNCSREVRKILEIANFQRLFTIEE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA