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The map label for this gene is 121998923

Identifier: 121998923

GI number: 121998923

Start: 2344771

End: 2345292

Strand: Reverse

Name: 121998923

Synonym: Hhal_2144

Alternate gene names: NA

Gene position: 2345292-2344771 (Counterclockwise)

Preceding gene: 121998924

Following gene: 121998922

Centisome position: 87.56

GC content: 72.61

Gene sequence:

>522_bases
ATGCGATTAGCGTGGCCGAATCGGTGCCGAGGCCCAGCCGGGTTCCTTGGGGTGGCGGTACTGGCCCTGGCGCTCAGTGC
CTGCGGCTGGCAGCTGCGCGGCGCCCCGGGCGGGATCTCCCTGGACGGACAGGTGATCCAGGTGGTTGATGAGGCGGGCA
GCAGTGAGCTGCGCCGCGAGGTGCGCCGCGGCATCCAGGGGGCGGGTGGGCAGTACACCGAGGGCGCCGCCGATGCCGAC
TGGGTGCTGACCCTGCACGGGCGGGGCAGCAGCCGTGACACGGCCTCGGTCGGGGCGGACGGTGACGTCCAGGACTACCG
CCTGACCTACACCATCGATTACAGCGTGGCCGGTGGGGACGGCGAGACCCGCATCCAGCGGACCTCGCTGGATGCCCAGC
GCACCTTCGCCGATCCGGCCGGTGGCGCCGATGAGCGTCGTGCCCGCGAGGCGGAGCTGGAGGAGGAGCTGCGCGCCGAC
GCCGTGCGCCTGTTGATGCTGCGCCTGCAGGCCCTGCGCTGA

Upstream 100 bases:

>100_bases
GGCCGACAAGGAGATCAAGAAGGTGGTCTTCGTCCCCGGCAAGCTCATCAACGTGGTGGCCAAGTAGCGGCTGTACCGCC
GCCTGGGCCAGGGGGTGCGG

Downstream 100 bases:

>100_bases
TGGCCGAGCGGCCGGAGACTCTCCACCGCCAGCTGGAGCGCGGGCCGCTGCCCCGAGTCTGTTTCATCGCCGGCGAGGAG
CCGCTGCTCCAGCGTGAGGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRLAWPNRCRGPAGFLGVAVLALALSACGWQLRGAPGGISLDGQVIQVVDEAGSSELRREVRRGIQGAGGQYTEGAADAD
WVLTLHGRGSSRDTASVGADGDVQDYRLTYTIDYSVAGGDGETRIQRTSLDAQRTFADPAGGADERRAREAELEEELRAD
AVRLLMLRLQALR

Sequences:

>Translated_173_residues
MRLAWPNRCRGPAGFLGVAVLALALSACGWQLRGAPGGISLDGQVIQVVDEAGSSELRREVRRGIQGAGGQYTEGAADAD
WVLTLHGRGSSRDTASVGADGDVQDYRLTYTIDYSVAGGDGETRIQRTSLDAQRTFADPAGGADERRAREAELEEELRAD
AVRLLMLRLQALR
>Mature_173_residues
MRLAWPNRCRGPAGFLGVAVLALALSACGWQLRGAPGGISLDGQVIQVVDEAGSSELRREVRRGIQGAGGQYTEGAADAD
WVLTLHGRGSSRDTASVGADGDVQDYRLTYTIDYSVAGGDGETRIQRTSLDAQRTFADPAGGADERRAREAELEEELRAD
AVRLLMLRLQALR

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18514; Mature: 18514

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAWPNRCRGPAGFLGVAVLALALSACGWQLRGAPGGISLDGQVIQVVDEAGSSELRRE
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHHHCCHHHHHHH
VRRGIQGAGGQYTEGAADADWVLTLHGRGSSRDTASVGADGDVQDYRLTYTIDYSVAGGD
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
GETRIQRTSLDAQRTFADPAGGADERRAREAELEEELRADAVRLLMLRLQALR
CCCEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLAWPNRCRGPAGFLGVAVLALALSACGWQLRGAPGGISLDGQVIQVVDEAGSSELRRE
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHHHCCHHHHHHH
VRRGIQGAGGQYTEGAADADWVLTLHGRGSSRDTASVGADGDVQDYRLTYTIDYSVAGGD
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
GETRIQRTSLDAQRTFADPAGGADERRAREAELEEELRADAVRLLMLRLQALR
CCCEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA