| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is mlaE [H]
Identifier: 121998898
GI number: 121998898
Start: 2322191
End: 2322967
Strand: Reverse
Name: mlaE [H]
Synonym: Hhal_2119
Alternate gene names: 121998898
Gene position: 2322967-2322191 (Counterclockwise)
Preceding gene: 121998899
Following gene: 121998897
Centisome position: 86.73
GC content: 66.28
Gene sequence:
>777_bases ATGATCGGCTTGTTCCAGGCGCTGGGGCAACGGACCCTGACTGCGCTGCGCGGCCTGGGCGAGGCGGTGCTGCTCATGGG GCGGATCCTGCGCGCCGCCCCCGAGGTGGTGGTGCGCCCCCGCCTGCTCATCGAGCAGGTCTACGCCGTCGGCGTGTTGT CGCTGGTGATCATCCTGGTGTCGGCGCTGTTCGTCGGTATGGTCCTCGGCCTGCAGGGGTACTACACCCTGGCGGACTTC GGGGCCACCGAAGCGGTGGGCACCATGGTCGCCCTGTCTCTAGTCCGCGAACTCGGGCCTGTGGTAACCGCGCTGCTGTT CGCCGGGCGGGCTGGCTCATCGCTGACCGCCGAGGTGGGGCTGATGAAGGCCACCGAGCAGCTCTCGAGCATGGAGATGA TGGCGGTGGACCCGGAGCGCCGTATTCTGGCCCCGCGCTTCTTCGCTGCCGTATTGGCGGTGCCACTGCTCGCCGCCGTG TTCAGCGCCGTGGGCGTGTTCGGTGGTTATCTGGTGGCGGTGGGCATGGTCGGGATCGACAGCGGCGCGTTCTGGTCCAA CATGCAGAACGCAGTCACCATCCAGGATGATATTTTGAATGGCGTGATCAAGAGCGTCGTCTTCGGCTTCTTGGTCGGCT GGATCGCCCTGCACAAGGGGTACATGGCAGAGCCGACCTCGAGCGGTGTCAGTCGGGCGACGACCTTGGGCGTCGTGCAC GCTTCGCTGGCGGTGCTCGGGCTCGACTTCCTGCTCACCGCACTGATGTTCGACTGA
Upstream 100 bases:
>100_bases AGTCGCTGCGCCAGTTTATCGATGCCCGGCCGGATGGTCCGGTGCCGTTCCACTATCCGGCGCCGCGGCTGTCCGACGAA CTGCTCGGCGGAGGGGGGCG
Downstream 100 bases:
>100_bases CGGAGCAAGGGTATGAGTCAGCGGCTCGTGGAGATCTGGGTCGGGGTGTTCGTGGCCATTGGCCTGGCGGCGATGATGGT CCTGGCCCTGCAGGTCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILVSALFVGMVLGLQGYYTLADF GATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAV FSAVGVFGGYLVAVGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVH ASLAVLGLDFLLTALMFD
Sequences:
>Translated_258_residues MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILVSALFVGMVLGLQGYYTLADF GATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAV FSAVGVFGGYLVAVGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVH ASLAVLGLDFLLTALMFD >Mature_258_residues MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILVSALFVGMVLGLQGYYTLADF GATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVGLMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAV FSAVGVFGGYLVAVGMVGIDSGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVH ASLAVLGLDFLLTALMFD
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=251, Percent_Identity=61.3545816733068, Blast_Score=297, Evalue=4e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27048; Mature: 27048
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH SALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVG HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVAVGMVGID HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVH CCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ASLAVLGLDFLLTALMFD HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGLFQALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH SALFVGMVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVG HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LMKATEQLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVAVGMVGID HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGAFWSNMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVH CCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ASLAVLGLDFLLTALMFD HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]