| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is cysQ [H]
Identifier: 121998837
GI number: 121998837
Start: 2260483
End: 2261307
Strand: Reverse
Name: cysQ [H]
Synonym: Hhal_2058
Alternate gene names: 121998837
Gene position: 2261307-2260483 (Counterclockwise)
Preceding gene: 121998838
Following gene: 121998836
Centisome position: 84.43
GC content: 71.88
Gene sequence:
>825_bases ATGGCAGAGCAACCGTGGCAGCACTGGCTGGAGCCGGTGCGGGAGATCGCCGAGCAGGCCGGCGAACGCATCATGGCCGT CTACCGTACCGCCGATTTCGAGGTGGAGGCCAAGGCGGACGACAGCCCGCTGACCCGGGCCGACCAGGCCGCCCACGACG CCATCAAGGCCGGGCTTACCGCGCTGACCCCCGATCTGCCCCAGCTCTCCGAGGAGGGCGAGGACATCGATCCTGCCGAA CGGCAGGCGTGGCGGCAGTACTGGCTGATCGACCCGCTGGACGGAACCCGGGAGTTCATCAAGCGCAACGGCGAGTTCAC CGTCAACATCGCCCTGGTGGTCGATGGTCGGCCGGTGCTCGGTGTGGTCCACGCCCCGGACCTGGGGGTGACCTGGGCGG CGACGGCCGGCGTAGACGCCTGGCGCGAGGCCGGCGGCCAGCGCCACAGCATCCGCACGCGCGCCGCCGCGTCGCCGCTG ACCGCCGTCGTCAGTCGCTCCCACCGCGAGGCAGCGGTGGCCGATATCCTCGCCCGCCTCGGGGACTACCGCGAGCTTTC GGTGGGCAGTTCGCTGAAGATCTGCCGCATCGCCGAGGGCGAGGCCGATCTCTACCCGCGCTTCGGGCCCACCTGCGAGT GGGATACCGGGGCCGCGCAGTGCGTGCTGGAGGTCGCCGGCGGTTGCCTGATGGACGTCGGCGGCGAGCCGCTGCGCTAC AACACCGGTGCCTCGCTGCTCAACCCGGACTTCATCGCCGTGGGCGACCCGGCCTACGACTGGGCGCGGGTCACCGACGG GCTCCCCTGGGAGGCGCGGCGCTAG
Upstream 100 bases:
>100_bases GATCTGACCGAGGCACGCTCGATCACCGCGCTTTATCTGGCGCGGGATCATCTGGCAGGGCGCGCGGCGTAACCCGCGCC GGAACAACACGGAAGGGATC
Downstream 100 bases:
>100_bases GCCGCCAGTCGGGCACTTGTGATTGTGGAGTCTCACCCGCATCATTAGGGGAGAGCAGGTTGTTCCGCAGCGGAGGTAAC CCCAGTGGCCGAGTCCATGG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAEQPWQHWLEPVREIAEQAGERIMAVYRTADFEVEAKADDSPLTRADQAAHDAIKAGLTALTPDLPQLSEEGEDIDPAE RQAWRQYWLIDPLDGTREFIKRNGEFTVNIALVVDGRPVLGVVHAPDLGVTWAATAGVDAWREAGGQRHSIRTRAAASPL TAVVSRSHREAAVADILARLGDYRELSVGSSLKICRIAEGEADLYPRFGPTCEWDTGAAQCVLEVAGGCLMDVGGEPLRY NTGASLLNPDFIAVGDPAYDWARVTDGLPWEARR
Sequences:
>Translated_274_residues MAEQPWQHWLEPVREIAEQAGERIMAVYRTADFEVEAKADDSPLTRADQAAHDAIKAGLTALTPDLPQLSEEGEDIDPAE RQAWRQYWLIDPLDGTREFIKRNGEFTVNIALVVDGRPVLGVVHAPDLGVTWAATAGVDAWREAGGQRHSIRTRAAASPL TAVVSRSHREAAVADILARLGDYRELSVGSSLKICRIAEGEADLYPRFGPTCEWDTGAAQCVLEVAGGCLMDVGGEPLRY NTGASLLNPDFIAVGDPAYDWARVTDGLPWEARR >Mature_273_residues AEQPWQHWLEPVREIAEQAGERIMAVYRTADFEVEAKADDSPLTRADQAAHDAIKAGLTALTPDLPQLSEEGEDIDPAER QAWRQYWLIDPLDGTREFIKRNGEFTVNIALVVDGRPVLGVVHAPDLGVTWAATAGVDAWREAGGQRHSIRTRAAASPLT AVVSRSHREAAVADILARLGDYRELSVGSSLKICRIAEGEADLYPRFGPTCEWDTGAAQCVLEVAGGCLMDVGGEPLRYN TGASLLNPDFIAVGDPAYDWARVTDGLPWEARR
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031789, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI116812595, Length=287, Percent_Identity=27.1777003484321, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1790659, Length=246, Percent_Identity=52.4390243902439, Blast_Score=226, Evalue=9e-61, Organism=Escherichia coli, GI1788882, Length=226, Percent_Identity=27.4336283185841, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71995905, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71995897, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17537869, Length=215, Percent_Identity=29.3023255813954, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320493, Length=212, Percent_Identity=28.7735849056604, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI24651149, Length=295, Percent_Identity=27.1186440677966, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24641722, Length=265, Percent_Identity=27.1698113207547, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664922, Length=269, Percent_Identity=23.4200743494424, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29927; Mature: 29795
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQPWQHWLEPVREIAEQAGERIMAVYRTADFEVEAKADDSPLTRADQAAHDAIKAGLT CCCCCHHHHHHHHHHHHHHHHHHEEEHEEECCEEEEECCCCCCCHHHHHHHHHHHHHCHH ALTPDLPQLSEEGEDIDPAERQAWRQYWLIDPLDGTREFIKRNGEFTVNIALVVDGRPVL HCCCCCHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEEEEEEECCCCEE GVVHAPDLGVTWAATAGVDAWREAGGQRHSIRTRAAASPLTAVVSRSHREAAVADILARL EEEECCCCCEEEEHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDYRELSVGSSLKICRIAEGEADLYPRFGPTCEWDTGAAQCVLEVAGGCLMDVGGEPLRY CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEE NTGASLLNPDFIAVGDPAYDWARVTDGLPWEARR CCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure AEQPWQHWLEPVREIAEQAGERIMAVYRTADFEVEAKADDSPLTRADQAAHDAIKAGLT CCCCHHHHHHHHHHHHHHHHHHEEEHEEECCEEEEECCCCCCCHHHHHHHHHHHHHCHH ALTPDLPQLSEEGEDIDPAERQAWRQYWLIDPLDGTREFIKRNGEFTVNIALVVDGRPVL HCCCCCHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEEEEEEECCCCEE GVVHAPDLGVTWAATAGVDAWREAGGQRHSIRTRAAASPLTAVVSRSHREAAVADILARL EEEECCCCCEEEEHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GDYRELSVGSSLKICRIAEGEADLYPRFGPTCEWDTGAAQCVLEVAGGCLMDVGGEPLRY CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEE NTGASLLNPDFIAVGDPAYDWARVTDGLPWEARR CCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]