| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is secG
Identifier: 121998545
GI number: 121998545
Start: 1939758
End: 1940174
Strand: Reverse
Name: secG
Synonym: Hhal_1766
Alternate gene names: 121998545
Gene position: 1940174-1939758 (Counterclockwise)
Preceding gene: 121998546
Following gene: 121998544
Centisome position: 72.44
GC content: 67.15
Gene sequence:
>417_bases ATGTTTGAAGCGTTGCTTGCCGTCCATATCGTCATCGCCGTAGCCCTGGTGGTGCTCGTGCTGCTGAACCAGGGAAAGGG CGCTGACATGGGAGCCGCCTTCGGCAGCGGTGCGTCGAGCACCGTATTCGGCTCGCGCGGGGCAGCAACCTTCATGACCA AGCTGATTGCGACCTTGGGGACAACCTTCTTCCTCACCAGTCTCGGGCTCGCGGTGATTGCCGCCCAGGGGGTTGGTGGC GGTGCCTCGGTGATCGGCGATGACGAGGGCGTGCTGGAGAGCGACGACGAGGAAGAGACCGACCCCGAGGCGCCGGCGGC CCCGGATATGCCGGCTGACGAGGATGCCCCGGCACCGGAAGCCCCTGGCGAGCCGGTGGGGCCGGAGGCGCCTGGGGAGG GGGAAGGAGAAGAGTAG
Upstream 100 bases:
>100_bases CCAGCCGGATATCGACGGGGGTCTGATCGGTGGCGCATCGCTGGATCCCGACAGTTTCCTTTCGATTTACAACGCAGCCG CGGAGGGCTGAGGTAGACCC
Downstream 100 bases:
>100_bases CCGGTTTCCGCGATCACGGGATTGATTCGCGGGATAAGGATTGCTATCATCTTTCCCGCGTTAGGGCAGGGTAAACGCCC GCGCAACAACGTCTACGTGC
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: P12; Preprotein translocase band 1 subunit [H]
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MFEALLAVHIVIAVALVVLVLLNQGKGADMGAAFGSGASSTVFGSRGAATFMTKLIATLGTTFFLTSLGLAVIAAQGVGG GASVIGDDEGVLESDDEEETDPEAPAAPDMPADEDAPAPEAPGEPVGPEAPGEGEGEE
Sequences:
>Translated_138_residues MFEALLAVHIVIAVALVVLVLLNQGKGADMGAAFGSGASSTVFGSRGAATFMTKLIATLGTTFFLTSLGLAVIAAQGVGG GASVIGDDEGVLESDDEEETDPEAPAAPDMPADEDAPAPEAPGEPVGPEAPGEGEGEE >Mature_138_residues MFEALLAVHIVIAVALVVLVLLNQGKGADMGAAFGSGASSTVFGSRGAATFMTKLIATLGTTFFLTSLGLAVIAAQGVGG GASVIGDDEGVLESDDEEETDPEAPAAPDMPADEDAPAPEAPGEPVGPEAPGEGEGEE
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=113, Percent_Identity=46.9026548672566, Blast_Score=99, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 13597; Mature: 13597
Theoretical pI: Translated: 3.40; Mature: 3.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEALLAVHIVIAVALVVLVLLNQGKGADMGAAFGSGASSTVFGSRGAATFMTKLIATLG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TTFFLTSLGLAVIAAQGVGGGASVIGDDEGVLESDDEEETDPEAPAAPDMPADEDAPAPE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGEPVGPEAPGEGEGEE CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFEALLAVHIVIAVALVVLVLLNQGKGADMGAAFGSGASSTVFGSRGAATFMTKLIATLG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TTFFLTSLGLAVIAAQGVGGGASVIGDDEGVLESDDEEETDPEAPAAPDMPADEDAPAPE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APGEPVGPEAPGEGEGEE CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]