| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yeaZ [H]
Identifier: 121998510
GI number: 121998510
Start: 1897227
End: 1897889
Strand: Reverse
Name: yeaZ [H]
Synonym: Hhal_1731
Alternate gene names: 121998510
Gene position: 1897889-1897227 (Counterclockwise)
Preceding gene: 121998514
Following gene: 121998508
Centisome position: 70.86
GC content: 72.7
Gene sequence:
>663_bases ATGACGCAGACCGTGATCGTGGCCCTGGAGACGGCCACCGAGGGGTGCTCGGTGGCCGTCTATTGTGACGGCGATGTCTT CCATCACTGTGAAGAGGCGCCGCGGCGGCACACCGCGCGGTTGCTGCCGATGCTCGAGGCGGTGATGGCGGAGGCCGGAG TCTGTGGCGAGCAGGTCTCGGCGCTGGCCTTCGGTCAGGGGCCCGGGGCTTTCGCCGGTGTGCGCCTAGCGGCCTCGGCA GCCCAAGGGTTGTGCACCGCGTGGGGGGTGCCGGCCTTGCCGGTCTCGACGCTGGCTGCCCTGGCGGCCGGCGGGCGTCG CCGCCATGGGGGCGGGTACGTGCTGGCGGCCCTGGACGCCCGGATGGGGCAGGTTTACTGGGGGCGTTACCGTGCCGCCG GGGATGCGGGTGTCGTGCTCGCCGAGGGGGTCGAGGCCGCCGATGCGCCGCAAGCCGTGCATGGCGGTGGTGCTGACTGG CTCGGGGTCGGGCGCGGCTTTGCGGCCTATGCCGAACAGCTGCCGGCCACCGGCGCCGGATGCGATCCCGATGCCTTGCC CGAGGCGCGCGACCTGCTGCCGATGGCCCTGGCCGACTGGCGAGCCGGCCGCACCTGCCACGCTGAGGCCATCCGTCCGG TCTACCTGCGTGAGGGTATTTAG
Upstream 100 bases:
>100_bases TCGCTGGCGCGGATCGGCGGTATAGTGCGCCGGCCGCAAGGCTCGCAGAGGTGATCAGTGCCCCAGCCCCGCGCAGCGGG GGTGGTGCAGGAGGGATGGG
Downstream 100 bases:
>100_bases CGGCCCCGTCCGCCGGGTTGTTCGTCTCGCACGAGGCAGTCCACGAAGCCGTCGGCCAACCGCTCCAGGAGCTGGAAGTA GGCGTCGGGGCCGGGTTCAA
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASA AQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADW LGVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI
Sequences:
>Translated_220_residues MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASA AQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADW LGVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI >Mature_219_residues TQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASAA QGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWL GVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=221, Percent_Identity=40.7239819004525, Blast_Score=158, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 22551; Mature: 22420
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVS CCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALAFGQGPGAFAGVRLAASAAQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDA HEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECC RMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWLGVGRGFAAYAEQLPATGAG HHCHHHHHHEECCCCCCEEEECCCCCCCCCCHHCCCCCCHHHCCCHHHHHHHHCCCCCCC CDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI CCCCCCCHHHHHHHHHHHHHCCCCEECHHHCCEEHHCCCC >Mature Secondary Structure TQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVS CCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALAFGQGPGAFAGVRLAASAAQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDA HEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECC RMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWLGVGRGFAAYAEQLPATGAG HHCHHHHHHEECCCCCCEEEECCCCCCCCCCHHCCCCCCHHHCCCHHHHHHHHCCCCCCC CDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI CCCCCCCHHHHHHHHHHHHHCCCCEECHHHCCEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]