Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is yeaZ [H]

Identifier: 121998510

GI number: 121998510

Start: 1897227

End: 1897889

Strand: Reverse

Name: yeaZ [H]

Synonym: Hhal_1731

Alternate gene names: 121998510

Gene position: 1897889-1897227 (Counterclockwise)

Preceding gene: 121998514

Following gene: 121998508

Centisome position: 70.86

GC content: 72.7

Gene sequence:

>663_bases
ATGACGCAGACCGTGATCGTGGCCCTGGAGACGGCCACCGAGGGGTGCTCGGTGGCCGTCTATTGTGACGGCGATGTCTT
CCATCACTGTGAAGAGGCGCCGCGGCGGCACACCGCGCGGTTGCTGCCGATGCTCGAGGCGGTGATGGCGGAGGCCGGAG
TCTGTGGCGAGCAGGTCTCGGCGCTGGCCTTCGGTCAGGGGCCCGGGGCTTTCGCCGGTGTGCGCCTAGCGGCCTCGGCA
GCCCAAGGGTTGTGCACCGCGTGGGGGGTGCCGGCCTTGCCGGTCTCGACGCTGGCTGCCCTGGCGGCCGGCGGGCGTCG
CCGCCATGGGGGCGGGTACGTGCTGGCGGCCCTGGACGCCCGGATGGGGCAGGTTTACTGGGGGCGTTACCGTGCCGCCG
GGGATGCGGGTGTCGTGCTCGCCGAGGGGGTCGAGGCCGCCGATGCGCCGCAAGCCGTGCATGGCGGTGGTGCTGACTGG
CTCGGGGTCGGGCGCGGCTTTGCGGCCTATGCCGAACAGCTGCCGGCCACCGGCGCCGGATGCGATCCCGATGCCTTGCC
CGAGGCGCGCGACCTGCTGCCGATGGCCCTGGCCGACTGGCGAGCCGGCCGCACCTGCCACGCTGAGGCCATCCGTCCGG
TCTACCTGCGTGAGGGTATTTAG

Upstream 100 bases:

>100_bases
TCGCTGGCGCGGATCGGCGGTATAGTGCGCCGGCCGCAAGGCTCGCAGAGGTGATCAGTGCCCCAGCCCCGCGCAGCGGG
GGTGGTGCAGGAGGGATGGG

Downstream 100 bases:

>100_bases
CGGCCCCGTCCGCCGGGTTGTTCGTCTCGCACGAGGCAGTCCACGAAGCCGTCGGCCAACCGCTCCAGGAGCTGGAAGTA
GGCGTCGGGGCCGGGTTCAA

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASA
AQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADW
LGVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI

Sequences:

>Translated_220_residues
MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASA
AQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADW
LGVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI
>Mature_219_residues
TQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVSALAFGQGPGAFAGVRLAASAA
QGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDARMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWL
GVGRGFAAYAEQLPATGAGCDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=221, Percent_Identity=40.7239819004525, Blast_Score=158, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 22551; Mature: 22420

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVS
CCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALAFGQGPGAFAGVRLAASAAQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDA
HEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECC
RMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWLGVGRGFAAYAEQLPATGAG
HHCHHHHHHEECCCCCCEEEECCCCCCCCCCHHCCCCCCHHHCCCHHHHHHHHCCCCCCC
CDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI
CCCCCCCHHHHHHHHHHHHHCCCCEECHHHCCEEHHCCCC
>Mature Secondary Structure 
TQTVIVALETATEGCSVAVYCDGDVFHHCEEAPRRHTARLLPMLEAVMAEAGVCGEQVS
CCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALAFGQGPGAFAGVRLAASAAQGLCTAWGVPALPVSTLAALAAGGRRRHGGGYVLAALDA
HEEECCCCCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHCCCCEECCCCEEEEEECC
RMGQVYWGRYRAAGDAGVVLAEGVEAADAPQAVHGGGADWLGVGRGFAAYAEQLPATGAG
HHCHHHHHHEECCCCCCEEEECCCCCCCCCCHHCCCCCCHHHCCCHHHHHHHHCCCCCCC
CDPDALPEARDLLPMALADWRAGRTCHAEAIRPVYLREGI
CCCCCCCHHHHHHHHHHHHHCCCCEECHHHCCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]