| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is zur [H]
Identifier: 121998508
GI number: 121998508
Start: 1895718
End: 1896212
Strand: Reverse
Name: zur [H]
Synonym: Hhal_1729
Alternate gene names: 121998508
Gene position: 1896212-1895718 (Counterclockwise)
Preceding gene: 121998510
Following gene: 121998507
Centisome position: 70.8
GC content: 65.05
Gene sequence:
>495_bases ATGGCCCGCTTACACCGCTCGCTGGTAACCGGATTCCCCAGCGAAGACCACGACCACGACGTCTGCCGCGAGACGGTCCT GGCGACCGCCGAGGTCATTTGTCGCCGTCGCGGCATGCGCTTTACGCGGCTGCGCCGCCGGGTGTTGGAGCTGATCTGGG ATGAGCACCGTCCGGTCAAGGCGTACGAGTTGCTGGATCGTCTGCGCGGCGAGCGGGCCGGCGCGGCGCCGCCCACCGTC TACCGCACCCTCGATTTCCTGTTGCAGGAAGGGCTGATCCATCGTGTGGAATCCCTGAACGCCTATGTCGGTTGCGGCAA ACCCGGGCACGTACACCCGGTTCAGCTGTTGGTCTGTCGCTCCTGTGCGGCGGTGGCCGAACTTGCCGACGATGATGTGG CGCGTTTGCTCCAGCACAAGGCCGGGCAGATGGGGTTCCAGACCGATTCCGCAGTGGTGGAGCTTGAAGGTGTATGTCCC CAGTGCAGCCGTTAG
Upstream 100 bases:
>100_bases GAGGAGTGCGGGAAGCGCTCGCATGGGTCGAATCCCCGGGACTTTTCACGGCATCGTTATGTTATACAATACCAAAATGC GCAACAACGGCGAGCACCCC
Downstream 100 bases:
>100_bases CTGGTAGGCAGGCCGCTGACGATCCGCTGATCCGTCTCCAGGAGGTGGCCGTGACCTTCGGCGGGCGATCCATACTCCAG GATGTCCGCCTGGAGGTGGT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MARLHRSLVTGFPSEDHDHDVCRETVLATAEVICRRRGMRFTRLRRRVLELIWDEHRPVKAYELLDRLRGERAGAAPPTV YRTLDFLLQEGLIHRVESLNAYVGCGKPGHVHPVQLLVCRSCAAVAELADDDVARLLQHKAGQMGFQTDSAVVELEGVCP QCSR
Sequences:
>Translated_164_residues MARLHRSLVTGFPSEDHDHDVCRETVLATAEVICRRRGMRFTRLRRRVLELIWDEHRPVKAYELLDRLRGERAGAAPPTV YRTLDFLLQEGLIHRVESLNAYVGCGKPGHVHPVQLLVCRSCAAVAELADDDVARLLQHKAGQMGFQTDSAVVELEGVCP QCSR >Mature_163_residues ARLHRSLVTGFPSEDHDHDVCRETVLATAEVICRRRGMRFTRLRRRVLELIWDEHRPVKAYELLDRLRGERAGAAPPTVY RTLDFLLQEGLIHRVESLNAYVGCGKPGHVHPVQLLVCRSCAAVAELADDDVARLLQHKAGQMGFQTDSAVVELEGVCPQ CSR
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=142, Percent_Identity=40.8450704225352, Blast_Score=106, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18479; Mature: 18347
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLHRSLVTGFPSEDHDHDVCRETVLATAEVICRRRGMRFTRLRRRVLELIWDEHRPVK CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH AYELLDRLRGERAGAAPPTVYRTLDFLLQEGLIHRVESLNAYVGCGKPGHVHPVQLLVCR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SCAAVAELADDDVARLLQHKAGQMGFQTDSAVVELEGVCPQCSR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCC >Mature Secondary Structure ARLHRSLVTGFPSEDHDHDVCRETVLATAEVICRRRGMRFTRLRRRVLELIWDEHRPVK CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH AYELLDRLRGERAGAAPPTVYRTLDFLLQEGLIHRVESLNAYVGCGKPGHVHPVQLLVCR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SCAAVAELADDDVARLLQHKAGQMGFQTDSAVVELEGVCPQCSR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]