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The map label for this gene is yceB [H]

Identifier: 121998488

GI number: 121998488

Start: 1867764

End: 1868345

Strand: Reverse

Name: yceB [H]

Synonym: Hhal_1709

Alternate gene names: 121998488

Gene position: 1868345-1867764 (Counterclockwise)

Preceding gene: 121998492

Following gene: 121998487

Centisome position: 69.75

GC content: 67.18

Gene sequence:

>582_bases
TTGAATCGTCAGCGATCCCCGATGCGAGCGCTGCATGGTGCGCTGCTCGCGCTGCTGCTCATGATCCTGGGCGGTTGCGC
GCAGCTGGTGAGTTATTCGGTCAATCAGGACGAGGTCCAGGCGCACTTGGATACACGCCTGGAAGCCTTGCAGGACGTGC
GCCTGCAGAGTCCGCTGGCGGCCTTCGACTTCTCCGTGCGGACGGCCGATGTGACCCTCGGACCGGAAGAGGCGCCGGAC
CGGATCCAGCTCGATATCCTCGGGCGGGCCGGCGTGGATCTGTTGATGGGGCAGGAATCGGCTGGTGTGGCCCTGCGACT
GCGCGGCTTGCCGGACTACGAGCATGAAGACGGGGCCATCTATATCCGGGAGCTGGAGTTGGTGAGCAGCCGGGTGGAGT
CGCGTTGGTTCAACGGTGAGGTGACGGAGCTGGTCGAGCCGGTGGTCGGGCTGGTGGGGGAGCACCTGGAGCGGACCCCG
GTCTACGAGATCGAGCGCGAGAGCGCCACCGGACGGGTGCTGGGCCGGGTCCCCGCAGAGGTACGGGTCGAGCCGGGCCG
TCTGGTCCTCAGGCCGCGCTAA

Upstream 100 bases:

>100_bases
GCCCGCCTCCTTGCCGAAACCCTTTATACTGGGTGCCTCCCCGGCGTCGGATGCGCGTTGTGCCATCCCGCCCCTGGCCT
CGCGAAAGGAGGTGGTTCTA

Downstream 100 bases:

>100_bases
CCCGTGGCTTTAACCCCCGAACAGCGGCAGGTCATCGAGCACCCGGGTGGGCACGCCCGGGTCAGTGCTGCGGCCGGTTC
CGGCAAGACAGCGACCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNRQRSPMRALHGALLALLLMILGGCAQLVSYSVNQDEVQAHLDTRLEALQDVRLQSPLAAFDFSVRTADVTLGPEEAPD
RIQLDILGRAGVDLLMGQESAGVALRLRGLPDYEHEDGAIYIRELELVSSRVESRWFNGEVTELVEPVVGLVGEHLERTP
VYEIERESATGRVLGRVPAEVRVEPGRLVLRPR

Sequences:

>Translated_193_residues
MNRQRSPMRALHGALLALLLMILGGCAQLVSYSVNQDEVQAHLDTRLEALQDVRLQSPLAAFDFSVRTADVTLGPEEAPD
RIQLDILGRAGVDLLMGQESAGVALRLRGLPDYEHEDGAIYIRELELVSSRVESRWFNGEVTELVEPVVGLVGEHLERTP
VYEIERESATGRVLGRVPAEVRVEPGRLVLRPR
>Mature_193_residues
MNRQRSPMRALHGALLALLLMILGGCAQLVSYSVNQDEVQAHLDTRLEALQDVRLQSPLAAFDFSVRTADVTLGPEEAPD
RIQLDILGRAGVDLLMGQESAGVALRLRGLPDYEHEDGAIYIRELELVSSRVESRWFNGEVTELVEPVVGLVGEHLERTP
VYEIERESATGRVLGRVPAEVRVEPGRLVLRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=188, Percent_Identity=26.063829787234, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010835 [H]

Pfam domain/function: PF07273 DUF1439 [H]

EC number: NA

Molecular weight: Translated: 21397; Mature: 21397

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQRSPMRALHGALLALLLMILGGCAQLVSYSVNQDEVQAHLDTRLEALQDVRLQSPLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AFDFSVRTADVTLGPEEAPDRIQLDILGRAGVDLLMGQESAGVALRLRGLPDYEHEDGAI
HHCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCEE
YIRELELVSSRVESRWFNGEVTELVEPVVGLVGEHLERTPVYEIERESATGRVLGRVPAE
EEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCE
VRVEPGRLVLRPR
EEECCCEEEECCC
>Mature Secondary Structure
MNRQRSPMRALHGALLALLLMILGGCAQLVSYSVNQDEVQAHLDTRLEALQDVRLQSPLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AFDFSVRTADVTLGPEEAPDRIQLDILGRAGVDLLMGQESAGVALRLRGLPDYEHEDGAI
HHCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCEE
YIRELELVSSRVESRWFNGEVTELVEPVVGLVGEHLERTPVYEIERESATGRVLGRVPAE
EEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCE
VRVEPGRLVLRPR
EEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 2872051 [H]