Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 121998477

GI number: 121998477

Start: 1854567

End: 1854938

Strand: Reverse

Name: yajC [H]

Synonym: Hhal_1698

Alternate gene names: 121998477

Gene position: 1854938-1854567 (Counterclockwise)

Preceding gene: 121998478

Following gene: 121998476

Centisome position: 69.25

GC content: 65.32

Gene sequence:

>372_bases
ATGCTGATGGACTTCTTCATCTCGCCCGCCCACGCCCAGCAAGCAGGCGGTGGGGGCGATATGCTGTTCTTTCTGATCTT
CACCGTCCTGTTGGTGGCGGTCTTCTACTTCCTGCTGATCCGGCCGCAGCGCCAGCGCATGAAGCAGCACCAGCAGATGG
TCGAGGGTCTTGCCGAGGGCGACGAGGTCGTGACCAGCGGGGGCGAGCTGGGCCGTATCACGCGCCTGGGTGAGCAGTTC
GTGCGCGTCGAGGTGGCCAAAGGCGTCGAGTGGAGCGTCAAGCGCGACATGATCGGCCACGTCCTGCCCAAGGGGACCTT
GGACGAGGCCCGCGGCGGCAAGGGCCACGCTCCGACCGAATCCACTGAGTGA

Upstream 100 bases:

>100_bases
GGCAAACGCCGCCGACCCTATGACATAATACGCCGCATCCGGGCCGCCGGAGGGCGGTGTCAATGCGCTAACCGACAGAT
TCTGAAGGGGGAATGCGCGC

Downstream 100 bases:

>100_bases
ACACCATGGAGAGCGTTATGGATTTTCTGATTTCCGCCGCGCAGGCTCAGCAGCAGCAGCCGGAGGAGCCCAACGTCTGG
TTCAGCATCATCCTGCTGGT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLMDFFISPAHAQQAGGGGDMLFFLIFTVLLVAVFYFLLIRPQRQRMKQHQQMVEGLAEGDEVVTSGGELGRITRLGEQF
VRVEVAKGVEWSVKRDMIGHVLPKGTLDEARGGKGHAPTESTE

Sequences:

>Translated_123_residues
MLMDFFISPAHAQQAGGGGDMLFFLIFTVLLVAVFYFLLIRPQRQRMKQHQQMVEGLAEGDEVVTSGGELGRITRLGEQF
VRVEVAKGVEWSVKRDMIGHVLPKGTLDEARGGKGHAPTESTE
>Mature_123_residues
MLMDFFISPAHAQQAGGGGDMLFFLIFTVLLVAVFYFLLIRPQRQRMKQHQQMVEGLAEGDEVVTSGGELGRITRLGEQF
VRVEVAKGVEWSVKRDMIGHVLPKGTLDEARGGKGHAPTESTE

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=107, Percent_Identity=38.3177570093458, Blast_Score=90, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13601; Mature: 13601

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMDFFISPAHAQQAGGGGDMLFFLIFTVLLVAVFYFLLIRPQRQRMKQHQQMVEGLAEG
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
DEVVTSGGELGRITRLGEQFVRVEVAKGVEWSVKRDMIGHVLPKGTLDEARGGKGHAPTE
CHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
STE
CCC
>Mature Secondary Structure
MLMDFFISPAHAQQAGGGGDMLFFLIFTVLLVAVFYFLLIRPQRQRMKQHQQMVEGLAEG
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
DEVVTSGGELGRITRLGEQFVRVEVAKGVEWSVKRDMIGHVLPKGTLDEARGGKGHAPTE
CHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
STE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]