Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998425

Identifier: 121998425

GI number: 121998425

Start: 1797896

End: 1798861

Strand: Reverse

Name: 121998425

Synonym: Hhal_1646

Alternate gene names: NA

Gene position: 1798861-1797896 (Counterclockwise)

Preceding gene: 121998428

Following gene: 121998423

Centisome position: 67.16

GC content: 67.81

Gene sequence:

>966_bases
TTGCTGAATCGTGCGCTGCTTTCGGGTCTTGTGGCTGGCATTTTCTCGGTAAGCCTATGGGGCAGTCTGCCGCTATTGCG
CCAACTTACCGAGTTGCCGGCCATGATGACGACGGTGGTGGCCCTCGCGGCGGCCGCCGCTGTCGCCTGGTGCTCGGCAA
TTTTTGTGCGCGAGCCCCACAGTCGAATGCCGGACCCGGATCTGAGCTATTGGCTCGGCGGCGTGCTCTCGCTTGTGGCA
GCGCTGTACCTCTACTTTGCCGCTCTGGCCTGGGGAGAGCCGGCGCGGGTGACGCTGGTGACGTACCTGTGGCCGGTCGT
CTTCGTGCTCGTCGCCAACTGGCTCGCCGGGTGCGGGGTGCAGCTGCGGGTGCTTCTCGGGATGGGGGTGGCGTTCATCG
GTGTGGCGCCGCTGATCCTCGGCGACGCGCCTGCCGGGGCCGAGACGCCGCTGGTGGCCTACGTCTTTGGGGTGATCAGT
GGCTGTGCCTGGGCGGCGTTCTCGGTCTATCTGACCCAGGCGGGTACGATCCCGTTCCGCGGCTACGCACGCATGTTTGC
ACAGGCCGCAGTGATCGCCGTGGTGCTCGCCGTGCTGTTCGGCGAGAGCGTCGGTACGCCCCAGAGTACGGACTGGTTGG
CGGCTGCGCTGATCGGGGTCGGGCCCTACGGCATCGCCTTTATGACCTGGGGGTTTGCCCTGCGTAAGGGGCCCACCGGG
TTGCTGGGTGTCCTGACCTACATGGTGCCGGTGATCTCCGCCGTGGTGCTGGTCCTCACCGGTTTCACCGAGCCGGAGCT
CGCCCTGCTGGTTGCGGGCCTGGCCGTGGTGGGCGGCGCGCTGCTGGCCCAGAGTGCCGAGGCTCAGTCCGAGTCCGGCG
CCGCCGAGCGAGATCCGGATGCGGTCGAGGATGCCTCAGCCCGCCGGGCGATGGACCGGGCCAGCCCCGAGAATATCAGG
GAGTGA

Upstream 100 bases:

>100_bases
ATGATCGGATGATTACGAAGATTCGTTTGGAAGATCGCGGGATGGTCCCTATATTACGCAGCCCGTTCAGGCCCATCAAA
AGGTTAGAGGAGGTTATGCG

Downstream 100 bases:

>100_bases
GCCGGGGCCAGGGCGTACCAGTAAAGGAGGCCCCAGACCCCGGCCGGGTGCCAGTGGTTGGCAACCGTGATCTTGGTCCC
GCCCTCGGCTTGCGGTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLNRALLSGLVAGIFSVSLWGSLPLLRQLTELPAMMTTVVALAAAAAVAWCSAIFVREPHSRMPDPDLSYWLGGVLSLVA
ALYLYFAALAWGEPARVTLVTYLWPVVFVLVANWLAGCGVQLRVLLGMGVAFIGVAPLILGDAPAGAETPLVAYVFGVIS
GCAWAAFSVYLTQAGTIPFRGYARMFAQAAVIAVVLAVLFGESVGTPQSTDWLAAALIGVGPYGIAFMTWGFALRKGPTG
LLGVLTYMVPVISAVVLVLTGFTEPELALLVAGLAVVGGALLAQSAEAQSESGAAERDPDAVEDASARRAMDRASPENIR
E

Sequences:

>Translated_321_residues
MLNRALLSGLVAGIFSVSLWGSLPLLRQLTELPAMMTTVVALAAAAAVAWCSAIFVREPHSRMPDPDLSYWLGGVLSLVA
ALYLYFAALAWGEPARVTLVTYLWPVVFVLVANWLAGCGVQLRVLLGMGVAFIGVAPLILGDAPAGAETPLVAYVFGVIS
GCAWAAFSVYLTQAGTIPFRGYARMFAQAAVIAVVLAVLFGESVGTPQSTDWLAAALIGVGPYGIAFMTWGFALRKGPTG
LLGVLTYMVPVISAVVLVLTGFTEPELALLVAGLAVVGGALLAQSAEAQSESGAAERDPDAVEDASARRAMDRASPENIR
E
>Mature_321_residues
MLNRALLSGLVAGIFSVSLWGSLPLLRQLTELPAMMTTVVALAAAAAVAWCSAIFVREPHSRMPDPDLSYWLGGVLSLVA
ALYLYFAALAWGEPARVTLVTYLWPVVFVLVANWLAGCGVQLRVLLGMGVAFIGVAPLILGDAPAGAETPLVAYVFGVIS
GCAWAAFSVYLTQAGTIPFRGYARMFAQAAVIAVVLAVLFGESVGTPQSTDWLAAALIGVGPYGIAFMTWGFALRKGPTG
LLGVLTYMVPVISAVVLVLTGFTEPELALLVAGLAVVGGALLAQSAEAQSESGAAERDPDAVEDASARRAMDRASPENIR
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33471; Mature: 33471

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA