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The map label for this gene is blc [C]

Identifier: 121998423

GI number: 121998423

Start: 1795799

End: 1796362

Strand: Reverse

Name: blc [C]

Synonym: Hhal_1644

Alternate gene names: 121998423

Gene position: 1796362-1795799 (Counterclockwise)

Preceding gene: 121998425

Following gene: 121998421

Centisome position: 67.07

GC content: 66.13

Gene sequence:

>564_bases
ATGACAGGCGCAGCGAGGATGTTCCCGGGCATCCGGGTGGCGCTTCTGGCCACCGCGGGAGGGCTGATGCTCGCGGGTTG
CACCGGGGCGCCCTCGGGGGTCGACCCCGTGGAGGGGTTCGACGCGGATCGTTATATGGGCGAGTGGTATTCAGTCAAGC
GCCTCGATCATCGCTTTGAGCGCGGGCTGACCGATGTCAGCGCGGAGTACTGGAGCCGGGAAGACGGACGGGTCGGGGTG
CGTAATCACGGCTACGATCCGGACGCCGGTGAGTGGCAGGAGATCGAGGGGACGGCCCGGTTCCAGGGGGAGCCGGAAGT
GGCCAGTCTTACAGTGACCTTCACGTGGCCCATTCGCGGCGGTTACCACGTCATCGCTCTGGATGAGGCTGAGTATCAGT
GGGCGATGGTCTCTGGCCCGACGCGCGGGTACCTGTGGATCCTCTCCCGAGAGCCGGATCTTGAGCAGGTGGTCCTGGAC
GACCTGATCCAGAAGGCCGGAGCGCTCGGCTTCGAGGTCGAAGAGCTGCAGCGCGTCGAGCACGGGGTGGCGCCATCAAG
GTGA

Upstream 100 bases:

>100_bases
AACTACTATGCAGTAGGATGGCTGATCGGGGCGAGAAGTTCATGGGTTGATTCGGACCTGTGACACCATGACTCGCAGAG
AGTCGGGTAGAGGGGGATCG

Downstream 100 bases:

>100_bases
ACATCGTGGCCCGCGTAGTCTGCGCCCGGGCGGGTCTCATGCCGGGGCGAAGCGGGCGATCAGGGCGTCCAGATCGGCCA
GCCGGAACGGCTTGAGCAGG

Product: Lipocalin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTGAARMFPGIRVALLATAGGLMLAGCTGAPSGVDPVEGFDADRYMGEWYSVKRLDHRFERGLTDVSAEYWSREDGRVGV
RNHGYDPDAGEWQEIEGTARFQGEPEVASLTVTFTWPIRGGYHVIALDEAEYQWAMVSGPTRGYLWILSREPDLEQVVLD
DLIQKAGALGFEVEELQRVEHGVAPSR

Sequences:

>Translated_187_residues
MTGAARMFPGIRVALLATAGGLMLAGCTGAPSGVDPVEGFDADRYMGEWYSVKRLDHRFERGLTDVSAEYWSREDGRVGV
RNHGYDPDAGEWQEIEGTARFQGEPEVASLTVTFTWPIRGGYHVIALDEAEYQWAMVSGPTRGYLWILSREPDLEQVVLD
DLIQKAGALGFEVEELQRVEHGVAPSR
>Mature_186_residues
TGAARMFPGIRVALLATAGGLMLAGCTGAPSGVDPVEGFDADRYMGEWYSVKRLDHRFERGLTDVSAEYWSREDGRVGVR
NHGYDPDAGEWQEIEGTARFQGEPEVASLTVTFTWPIRGGYHVIALDEAEYQWAMVSGPTRGYLWILSREPDLEQVVLDD
LIQKAGALGFEVEELQRVEHGVAPSR

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=167, Percent_Identity=46.7065868263473, Blast_Score=153, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272
- InterPro:   IPR002449 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20690; Mature: 20559

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAARMFPGIRVALLATAGGLMLAGCTGAPSGVDPVEGFDADRYMGEWYSVKRLDHRFE
CCCCCHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGLTDVSAEYWSREDGRVGVRNHGYDPDAGEWQEIEGTARFQGEPEVASLTVTFTWPIRG
CCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCEECCCCEEECCCCCEEEEEEEEEEECCC
GYHVIALDEAEYQWAMVSGPTRGYLWILSREPDLEQVVLDDLIQKAGALGFEVEELQRVE
CEEEEEEECCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
HGVAPSR
HCCCCCC
>Mature Secondary Structure 
TGAARMFPGIRVALLATAGGLMLAGCTGAPSGVDPVEGFDADRYMGEWYSVKRLDHRFE
CCCCHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGLTDVSAEYWSREDGRVGVRNHGYDPDAGEWQEIEGTARFQGEPEVASLTVTFTWPIRG
CCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCEECCCCEEECCCCCEEEEEEEEEEECCC
GYHVIALDEAEYQWAMVSGPTRGYLWILSREPDLEQVVLDDLIQKAGALGFEVEELQRVE
CEEEEEEECCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
HGVAPSR
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7559452 [H]