Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998407

Identifier: 121998407

GI number: 121998407

Start: 1776519

End: 1777334

Strand: Reverse

Name: 121998407

Synonym: Hhal_1628

Alternate gene names: NA

Gene position: 1777334-1776519 (Counterclockwise)

Preceding gene: 121998408

Following gene: 121998406

Centisome position: 66.36

GC content: 64.09

Gene sequence:

>816_bases
ATGGTCGAGTACCTTCTTCCGGCGCTTTTCGCGCTGTTCCTCTGGTGGTTCAGCACGGGCGTGGTGATCTACCTGGACAA
CCTCCCGGTGCACACGTTCCGCTGGAGCATGCTCGGCGGCACAGTCGGCCTGGCGCTCGGCTTGTACGGGGTGGCGGCGA
CCAGCACGGACACCTCCGTAGGAGGCGCCTACCTCGCCTTTACCAGCGCACTCCTCGTCTGGGCCTGGGTCGAGCTGAGC
TACTATACCAACTACCTGACCGGACCTAGGCAGGTTCGGTGCCCGCAGGACTGCTCAGGTTGGCGTCACTTCGGCCACGC
CCTGCAAAGCAACGTCTACCACGAGGTGGCAATTGTCGTGCTCGGCGTGGTCCTGGCGATCCTGACCTGGGGAGACGGCA
ATCTGGTGGCGCTGTGGACATTCCTGGTGCTGGCCTGGATGCACGAGAGCGCGCGGGTCAACGTGTTCCTGGGGGTGCGT
AACCTCAACGAGGAATTCGTCCCGGATCATATGCATTTCCTCCGCGGCTTCATGCGCCGGCGTCCGATGAATCTCTTCTT
CCCGTTCTCGGTGAGCATCTCCACGGTGGCGCTGGTGCTCTTGGTGCAGGCGGCCATGGCGCCGGGGATCGACGCGTTCA
CCGCGGTGGGATTGACCCTCGTTGCGACGCTGATGGCGCTGGCTATCCTCGAGCACTGGTTCCTGGTCATCCCGATGCCC
ACGGCGTTCCTGTGGCAGTGGGGGCTCAAAGCACGCAATCGCGGTGATCAAGGGGTGGCGACGAAGACCGCCGACGCGGA
CGCGTCCTCCTCCTGA

Upstream 100 bases:

>100_bases
GCCAGGGCGTGGATCTCGCGGCGTTCGGCGAGGACAACGCCGGCGCCTTCGCCCGGTTCCTGGAGACTGAGGACGACGAG
AACAGCGTCGAGGGGCCGTA

Downstream 100 bases:

>100_bases
GGGCAAGGGCGAATCATGCTCGGGGGTCGAGGCACGGCGTGGCGGGACTTGGGACTAGCAGGGATCGCCCTGGCGGCGAT
TGGCTTGGCCCTGTACCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF274 [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS
YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR
NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP
TAFLWQWGLKARNRGDQGVATKTADADASSS

Sequences:

>Translated_271_residues
MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS
YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR
NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP
TAFLWQWGLKARNRGDQGVATKTADADASSS
>Mature_271_residues
MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS
YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR
NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP
TAFLWQWGLKARNRGDQGVATKTADADASSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017496 [H]

Pfam domain/function: PF12291 DUF3623 [H]

EC number: NA

Molecular weight: Translated: 30017; Mature: 30017

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSV
CHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGAYLAFTSALLVWAWVELSYYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVRNLNEEFVPDHMHFLRGFMRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCHHHHHHHHHHHHC
RPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP
CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
TAFLWQWGLKARNRGDQGVATKTADADASSS
HHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSV
CHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGAYLAFTSALLVWAWVELSYYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVRNLNEEFVPDHMHFLRGFMRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCHHHHHHHHHHHHC
RPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP
CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
TAFLWQWGLKARNRGDQGVATKTADADASSS
HHHHHHHHHHHCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA