| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is crtF [H]
Identifier: 121998391
GI number: 121998391
Start: 1753323
End: 1754468
Strand: Reverse
Name: crtF [H]
Synonym: Hhal_1612
Alternate gene names: 121998391
Gene position: 1754468-1753323 (Counterclockwise)
Preceding gene: 121998392
Following gene: 121998390
Centisome position: 65.5
GC content: 70.77
Gene sequence:
>1146_bases GTGATCCGCACCTGGCGAAATAGTCCGTGGCGGGACCGCCTGCACGACTGGCGGGACCGCCTGCTGGCTAGCTCCCGCTT CCACCGGCTGGCCGCGCGCTTCCCGCTGACCCGACCCATCGCCCGGCGACGCTCCAGCGAGCTGTTCGACCTGTGCGCCG GCTTCATCTACTCGCAGGTCGTCCTGGCCAGTGTGCGCAGCGGCCTGCTGGATCTGCTCAATGAGGGGGCGCAGCCGCCC GACCGGTTGTTGAGCCGTCTCGGATTGCCCGAGATGGCCGGCCAGCGGCTGCTCGAGGCGGCCGTGGCCTTGCGCCTGGC CGAGGTTCGAAGCGCCGGGCGCTACGGCCTCGGCGACCTGGGGGCCGTGCTGGTGGCGGCGCCCGGGGTCCGCGCCATGG TCGAGCACCACGCCCTGCTCTACGAGGATCTCCAAGATCCGTTGGCCCTGCTACAGGGTGAGCGCGGCGCCACGGCCCTT GGGCGTTACTGGGCCTACGCCGGCAACCAGGCGCCGGATACCCTGACCGGCATCGAAGTCGGGGCGTACAGCGGTCTGAT GGCCGCATCACAGCCGATGGTGGCCGCGGAGGTACTCGACGCCTATTCGCTGCGTCGCCACCGACGCCTGATGGATGTCG GCGGCGGTGAGGGGGCCTTCCTGATGGCGGCTGCCCGCCGCTGGCCGCACCTGCAGGGGCGGGTGGTGGATCTCCCCGCC GTGGCGGAGCGGGCGCAGGGGCGCATCGACGAGGAGGGGCTCAATGGGCGCCTCGAGTCCCTGGGGCTCGACTTCTTCCG GGATCCCCTGCCCGGCGATGTCGACGTCGTCACGCTGGTGCGCATCCTGCATGATCACGATGATCAGGAGGCGGCTCGGT TGCTTGACAACCTCCACCGCAGCCTGGAGCCCGGGACCACGGTGCTGGTCGCCGAGCCGATGGCGGGAACCCCGGGGGCA GAGCGGGTGGGGGGCGCCTACTTCGGCATCTACCTCTTCGCCATGGGTCGGGGGCGCCCCCGTACCGTCGCCGAGAACCG CGGGCTTCTCGAGGCCGCCGGCTTCGAACAGGTTCGGCTGCTGCCAGGCTGCAATCCGCTCCAGGCCCGTGTGATTGCGG CTAAAAGCCGCAGTCTATCCCGGTGA
Upstream 100 bases:
>100_bases TCGATGCCGTGCCGGAATGCGCCGGGGCCGAGCAGCTGCGCGCGGGGATCCTCCAGGAGATGGAACGGGTGCTGCCCGAG AGCTTGGGCCGTAGCGCGGC
Downstream 100 bases:
>100_bases TCGACCAGCTTGACACACGGGGAAGTCAAGTTAGGCTGACACCATGTCTGACCCAAGCCCTGCATCGAGTGTCGATCCGG GTGGGCCGGGTTCCGGTCCC
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: O-methylase [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MIRTWRNSPWRDRLHDWRDRLLASSRFHRLAARFPLTRPIARRRSSELFDLCAGFIYSQVVLASVRSGLLDLLNEGAQPP DRLLSRLGLPEMAGQRLLEAAVALRLAEVRSAGRYGLGDLGAVLVAAPGVRAMVEHHALLYEDLQDPLALLQGERGATAL GRYWAYAGNQAPDTLTGIEVGAYSGLMAASQPMVAAEVLDAYSLRRHRRLMDVGGGEGAFLMAAARRWPHLQGRVVDLPA VAERAQGRIDEEGLNGRLESLGLDFFRDPLPGDVDVVTLVRILHDHDDQEAARLLDNLHRSLEPGTTVLVAEPMAGTPGA ERVGGAYFGIYLFAMGRGRPRTVAENRGLLEAAGFEQVRLLPGCNPLQARVIAAKSRSLSR
Sequences:
>Translated_381_residues MIRTWRNSPWRDRLHDWRDRLLASSRFHRLAARFPLTRPIARRRSSELFDLCAGFIYSQVVLASVRSGLLDLLNEGAQPP DRLLSRLGLPEMAGQRLLEAAVALRLAEVRSAGRYGLGDLGAVLVAAPGVRAMVEHHALLYEDLQDPLALLQGERGATAL GRYWAYAGNQAPDTLTGIEVGAYSGLMAASQPMVAAEVLDAYSLRRHRRLMDVGGGEGAFLMAAARRWPHLQGRVVDLPA VAERAQGRIDEEGLNGRLESLGLDFFRDPLPGDVDVVTLVRILHDHDDQEAARLLDNLHRSLEPGTTVLVAEPMAGTPGA ERVGGAYFGIYLFAMGRGRPRTVAENRGLLEAAGFEQVRLLPGCNPLQARVIAAKSRSLSR >Mature_381_residues MIRTWRNSPWRDRLHDWRDRLLASSRFHRLAARFPLTRPIARRRSSELFDLCAGFIYSQVVLASVRSGLLDLLNEGAQPP DRLLSRLGLPEMAGQRLLEAAVALRLAEVRSAGRYGLGDLGAVLVAAPGVRAMVEHHALLYEDLQDPLALLQGERGATAL GRYWAYAGNQAPDTLTGIEVGAYSGLMAASQPMVAAEVLDAYSLRRHRRLMDVGGGEGAFLMAAARRWPHLQGRVVDLPA VAERAQGRIDEEGLNGRLESLGLDFFRDPLPGDVDVVTLVRILHDHDDQEAARLLDNLHRSLEPGTTVLVAEPMAGTPGA ERVGGAYFGIYLFAMGRGRPRTVAENRGLLEAAGFEQVRLLPGCNPLQARVIAAKSRSLSR
Specific function: Converts hydroxyneurosporene to methoxyneurosporene or demethylspheroidene to spheroidene [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI291045183, Length=350, Percent_Identity=27.4285714285714, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI117553627, Length=350, Percent_Identity=27.4285714285714, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI291045181, Length=350, Percent_Identity=27.4285714285714, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016461 - InterPro: IPR001077 - InterPro: IPR011991 [H]
Pfam domain/function: PF00891 Methyltransf_2 [H]
EC number: NA
Molecular weight: Translated: 41708; Mature: 41708
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTWRNSPWRDRLHDWRDRLLASSRFHRLAARFPLTRPIARRRSSELFDLCAGFIYSQV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VLASVRSGLLDLLNEGAQPPDRLLSRLGLPEMAGQRLLEAAVALRLAEVRSAGRYGLGDL HHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GAVLVAAPGVRAMVEHHALLYEDLQDPLALLQGERGATALGRYWAYAGNQAPDTLTGIEV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCH GAYSGLMAASQPMVAAEVLDAYSLRRHRRLMDVGGGEGAFLMAAARRWPHLQGRVVDLPA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCHH VAERAQGRIDEEGLNGRLESLGLDFFRDPLPGDVDVVTLVRILHDHDDQEAARLLDNLHR HHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH SLEPGTTVLVAEPMAGTPGAERVGGAYFGIYLFAMGRGRPRTVAENRGLLEAAGFEQVRL HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCEEE LPGCNPLQARVIAAKSRSLSR CCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MIRTWRNSPWRDRLHDWRDRLLASSRFHRLAARFPLTRPIARRRSSELFDLCAGFIYSQV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VLASVRSGLLDLLNEGAQPPDRLLSRLGLPEMAGQRLLEAAVALRLAEVRSAGRYGLGDL HHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH GAVLVAAPGVRAMVEHHALLYEDLQDPLALLQGERGATALGRYWAYAGNQAPDTLTGIEV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCH GAYSGLMAASQPMVAAEVLDAYSLRRHRRLMDVGGGEGAFLMAAARRWPHLQGRVVDLPA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCHH VAERAQGRIDEEGLNGRLESLGLDFFRDPLPGDVDVVTLVRILHDHDDQEAARLLDNLHR HHHHHCCCCCCCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH SLEPGTTVLVAEPMAGTPGAERVGGAYFGIYLFAMGRGRPRTVAENRGLLEAAGFEQVRL HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCEEE LPGCNPLQARVIAAKSRSLSR CCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721699; 10648776 [H]