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The map label for this gene is pufL [H]

Identifier: 121998384

GI number: 121998384

Start: 1746546

End: 1747376

Strand: Reverse

Name: pufL [H]

Synonym: Hhal_1605

Alternate gene names: 121998384

Gene position: 1747376-1746546 (Counterclockwise)

Preceding gene: 121998385

Following gene: 121998383

Centisome position: 65.24

GC content: 61.97

Gene sequence:

>831_bases
ATGGCGATGCTCGACTTTGAAAAAAAATACCGTGTCCGAGGAGGTACACTCCTCGGAGGGGACTTGTTTGACTTTTGGAT
TGGGCCGTTCTACGTGGGCATCTTCGGGGTGCTTACGGCGATCTTCGCGGTCCTTGGCACCGTCCTGATCATCTACGGTG
CTTCGCAAGACACCTTCAATCTGTGGCAGATCTCCATTGCCCCACCTGACCTGAGCTATGGGCTGGCCCTTGCGCCCATG
ATGGAGGGCGGCCTCTGGCAGATCATCACCGTCTGCGCCCTGGGCGCCTTCATTGCGTGGGCCCTGCGTCAGGCGGAGAT
CTCCAAGAAGCTCGGCATGGGCTATCACGTGCCGGTGGCCTTCGCGGTCGCGATCCTGGCCTACGCGACGCTGGTGGTCT
TCCGGCCGCTTCTGATGGGCGCCTGGGGGCATGGGTTCCCGTACGGGATCCTGAGCCACCTGGATTGGGTGTCGAACGTG
GGGTACCAGTACCTCCACTTCCACTACAACCCGGCCCACATGCTGGCCGTGACCTTCTTCTTCACCACCACCCTGGCCCT
GGCCCTGCACGGTGGCTTGATCCTGTCGGTCACCAACCCGAAGAAGGGCGAGTCGGTGAAGACCGCGGAGCATGAGAATA
CCTTCTTCCGCGACGTCGTCGGCTACTCGATCGGCAGCCTGGGTATCCACCGTCTCGGCCTGTTCCTGGCCCTGAACGCC
GCTTTCTGGAGTGCCGTGTGCATCATCATTAGCGGCCCGTTCTGGACCCGCGGTTGGCCCGAGTGGTGGAACTGGTGGCT
CAACGTCCCGATCTGGTCCTGGGGGGGGTAA

Upstream 100 bases:

>100_bases
GGGAGGACCGCCCCGGTGTGACTCACACTCGGGGCGGTCGCTCGCCGAAGGCTCCGGGATCCCTGAGGCGCCGTGTTGCC
CGTGATGTGAGGACCCAGCC

Downstream 100 bases:

>100_bases
TCAGAAATGGCTGAGTATCAGAATATCTTTACCCGTGTTCAGGTCCGGGGCCCGACGGATCCGGGCGTAGAGCTCCCGGC
CGCCGACTGGCCGCGGACCA

Product: photosynthetic reaction center subunit L

Products: NA

Alternate protein names: Photosynthetic reaction center L subunit [H]

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAMLDFEKKYRVRGGTLLGGDLFDFWIGPFYVGIFGVLTAIFAVLGTVLIIYGASQDTFNLWQISIAPPDLSYGLALAPM
MEGGLWQIITVCALGAFIAWALRQAEISKKLGMGYHVPVAFAVAILAYATLVVFRPLLMGAWGHGFPYGILSHLDWVSNV
GYQYLHFHYNPAHMLAVTFFFTTTLALALHGGLILSVTNPKKGESVKTAEHENTFFRDVVGYSIGSLGIHRLGLFLALNA
AFWSAVCIIISGPFWTRGWPEWWNWWLNVPIWSWGG

Sequences:

>Translated_276_residues
MAMLDFEKKYRVRGGTLLGGDLFDFWIGPFYVGIFGVLTAIFAVLGTVLIIYGASQDTFNLWQISIAPPDLSYGLALAPM
MEGGLWQIITVCALGAFIAWALRQAEISKKLGMGYHVPVAFAVAILAYATLVVFRPLLMGAWGHGFPYGILSHLDWVSNV
GYQYLHFHYNPAHMLAVTFFFTTTLALALHGGLILSVTNPKKGESVKTAEHENTFFRDVVGYSIGSLGIHRLGLFLALNA
AFWSAVCIIISGPFWTRGWPEWWNWWLNVPIWSWGG
>Mature_275_residues
AMLDFEKKYRVRGGTLLGGDLFDFWIGPFYVGIFGVLTAIFAVLGTVLIIYGASQDTFNLWQISIAPPDLSYGLALAPMM
EGGLWQIITVCALGAFIAWALRQAEISKKLGMGYHVPVAFAVAILAYATLVVFRPLLMGAWGHGFPYGILSHLDWVSNVG
YQYLHFHYNPAHMLAVTFFFTTTLALALHGGLILSVTNPKKGESVKTAEHENTFFRDVVGYSIGSLGIHRLGLFLALNAA
FWSAVCIIISGPFWTRGWPEWWNWWLNVPIWSWGG

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005871
- InterPro:   IPR000484 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 30656; Mature: 30525

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLDFEKKYRVRGGTLLGGDLFDFWIGPFYVGIFGVLTAIFAVLGTVLIIYGASQDTFN
CCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE
LWQISIAPPDLSYGLALAPMMEGGLWQIITVCALGAFIAWALRQAEISKKLGMGYHVPVA
EEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FAVAILAYATLVVFRPLLMGAWGHGFPYGILSHLDWVSNVGYQYLHFHYNPAHMLAVTFF
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
FTTTLALALHGGLILSVTNPKKGESVKTAEHENTFFRDVVGYSIGSLGIHRLGLFLALNA
HHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWSAVCIIISGPFWTRGWPEWWNWWLNVPIWSWGG
HHHHHHHHEEECCCCCCCCHHHHHHEECCEEECCCC
>Mature Secondary Structure 
AMLDFEKKYRVRGGTLLGGDLFDFWIGPFYVGIFGVLTAIFAVLGTVLIIYGASQDTFN
CCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE
LWQISIAPPDLSYGLALAPMMEGGLWQIITVCALGAFIAWALRQAEISKKLGMGYHVPVA
EEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FAVAILAYATLVVFRPLLMGAWGHGFPYGILSHLDWVSNVGYQYLHFHYNPAHMLAVTFF
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
FTTTLALALHGGLILSVTNPKKGESVKTAEHENTFFRDVVGYSIGSLGIHRLGLFLALNA
HHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWSAVCIIISGPFWTRGWPEWWNWWLNVPIWSWGG
HHHHHHHHEEECCCCCCCCHHHHHHEECCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300574; 8879238; 11343129 [H]