| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yveL [H]
Identifier: 121998302
GI number: 121998302
Start: 1647660
End: 1648658
Strand: Reverse
Name: yveL [H]
Synonym: Hhal_1520
Alternate gene names: 121998302
Gene position: 1648658-1647660 (Counterclockwise)
Preceding gene: 121998303
Following gene: 121998301
Centisome position: 61.55
GC content: 64.96
Gene sequence:
>999_bases ATGAGCATTATCGAGCGGGCGCTGGAGAAGCGCCGAGGCAACCAGGCACCCGGTGCACAAGCGCAAGGTTCGGTCCAGGG GGCCGGACAACAGGAGGCCGATCCGGCGGGCGAGACGACCCAGACGGAATATGCGCAGGCCAGGCCCTCCACGCCGCAGT TCGGACGCGCGCCGCGCACCGTCGAACGACCGGCCGACGTCCGGATTGATTACGGGTGGTTGCGCCATCAGGGGATCCAG GTTCCAGGAGAGGCGCGCAGCGGGCTTGAAGAGGAGTTCCGCTTGATGAAGCGCCCGCTGCTCGATAACGCCTTCGGGCG CCATGGCATGCCGGTAGTGGATAAAGGGCGGTTGATCATGGTGACCAGTGCCGTCCCCGGGGAGGGTAAGACCTTCTCCA CGATCAACCTCGCGCTGAGCATCGCCATGGAGGTGGATCGCACGGTTCTGGTCGTCGATGCCGACGTGGCACGTCCGAGC GTCCCGCGAACACTTGGATTCGCGGCCGACAGGGGGCTCATGGACCTGTTGACCGACTCTGATCTTCGTCTGCCGGACGT GCTCCTGCGCACCGATATCCCTGATCTCAGTGTGTTGCCAGCCGGACGTCCCCACGGTCGTTCGACGGAGTTACTGGCCA GTCAGGGTATGACCGATCTGCTGGAGGAGATCCACGAGCGCTACCCGGATCGGGTGATCCTCTTCGATTCCCCCCCGCTG CTCTCGACCAGTGAACCGAGTGTGCTGGCCCGGGAGATGGGGCAGGTGCTCCTCGTGATCGAGGCTGAGGGTACGGCGCA AACGGCGGTGATGCGGGCCGCGGAGCTGCTGGAGGGGTGCGACGTGGTGCTGACCATGCTCAACAAAGCGACCGGTCATG GAGGGCTGGGATACAGCGGTTACGGCTACGGCTACGGTTACGGTTACGGTAAATACGGTGGGGAGCCCCGGAGCAGCGCC GCCAAGGAAGCGGATGGCCGTGTCGCCGAGGGTAGCTAG
Upstream 100 bases:
>100_bases GCGCATGGAGATGCTCGTCTTCTTCAGCGCAACCGGAGCCTTGTTGGTTGCCTATGGGGTGGTGGTTGGGGTCTTTTTTG CCTAGTCGGACGAGGGGCGT
Downstream 100 bases:
>100_bases GGCGCGGGCGCTGCCGGGCGCCGCGGCCGCCTTGGGGCTTCTGCTGATTTCCGGGGCCAGTATCGCTTCGACACAGTGGA CCTTCACCCCGCGCATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSIIERALEKRRGNQAPGAQAQGSVQGAGQQEADPAGETTQTEYAQARPSTPQFGRAPRTVERPADVRIDYGWLRHQGIQ VPGEARSGLEEEFRLMKRPLLDNAFGRHGMPVVDKGRLIMVTSAVPGEGKTFSTINLALSIAMEVDRTVLVVDADVARPS VPRTLGFAADRGLMDLLTDSDLRLPDVLLRTDIPDLSVLPAGRPHGRSTELLASQGMTDLLEEIHERYPDRVILFDSPPL LSTSEPSVLAREMGQVLLVIEAEGTAQTAVMRAAELLEGCDVVLTMLNKATGHGGLGYSGYGYGYGYGYGKYGGEPRSSA AKEADGRVAEGS
Sequences:
>Translated_332_residues MSIIERALEKRRGNQAPGAQAQGSVQGAGQQEADPAGETTQTEYAQARPSTPQFGRAPRTVERPADVRIDYGWLRHQGIQ VPGEARSGLEEEFRLMKRPLLDNAFGRHGMPVVDKGRLIMVTSAVPGEGKTFSTINLALSIAMEVDRTVLVVDADVARPS VPRTLGFAADRGLMDLLTDSDLRLPDVLLRTDIPDLSVLPAGRPHGRSTELLASQGMTDLLEEIHERYPDRVILFDSPPL LSTSEPSVLAREMGQVLLVIEAEGTAQTAVMRAAELLEGCDVVLTMLNKATGHGGLGYSGYGYGYGYGYGKYGGEPRSSA AKEADGRVAEGS >Mature_331_residues SIIERALEKRRGNQAPGAQAQGSVQGAGQQEADPAGETTQTEYAQARPSTPQFGRAPRTVERPADVRIDYGWLRHQGIQV PGEARSGLEEEFRLMKRPLLDNAFGRHGMPVVDKGRLIMVTSAVPGEGKTFSTINLALSIAMEVDRTVLVVDADVARPSV PRTLGFAADRGLMDLLTDSDLRLPDVLLRTDIPDLSVLPAGRPHGRSTELLASQGMTDLLEEIHERYPDRVILFDSPPLL STSEPSVLAREMGQVLLVIEAEGTAQTAVMRAAELLEGCDVVLTMLNKATGHGGLGYSGYGYGYGYGYGKYGGEPRSSAA KEADGRVAEGS
Specific function: Unknown
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI1787216, Length=145, Percent_Identity=31.7241379310345, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082032, Length=199, Percent_Identity=26.1306532663317, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 35671; Mature: 35540
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIERALEKRRGNQAPGAQAQGSVQGAGQQEADPAGETTQTEYAQARPSTPQFGRAPRT CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC VERPADVRIDYGWLRHQGIQVPGEARSGLEEEFRLMKRPLLDNAFGRHGMPVVDKGRLIM CCCCCCEEEECHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEE VTSAVPGEGKTFSTINLALSIAMEVDRTVLVVDADVARPSVPRTLGFAADRGLMDLLTDS EEECCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCC DLRLPDVLLRTDIPDLSVLPAGRPHGRSTELLASQGMTDLLEEIHERYPDRVILFDSPPL CCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC LSTSEPSVLAREMGQVLLVIEAEGTAQTAVMRAAELLEGCDVVLTMLNKATGHGGLGYSG CCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YGYGYGYGYGKYGGEPRSSAAKEADGRVAEGS CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure SIIERALEKRRGNQAPGAQAQGSVQGAGQQEADPAGETTQTEYAQARPSTPQFGRAPRT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC VERPADVRIDYGWLRHQGIQVPGEARSGLEEEFRLMKRPLLDNAFGRHGMPVVDKGRLIM CCCCCCEEEECHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEE VTSAVPGEGKTFSTINLALSIAMEVDRTVLVVDADVARPSVPRTLGFAADRGLMDLLTDS EEECCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCC DLRLPDVLLRTDIPDLSVLPAGRPHGRSTELLASQGMTDLLEEIHERYPDRVILFDSPPL CCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC LSTSEPSVLAREMGQVLLVIEAEGTAQTAVMRAAELLEGCDVVLTMLNKATGHGGLGYSG CCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YGYGYGYGYGKYGGEPRSSAAKEADGRVAEGS CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]