| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998297
Identifier: 121998297
GI number: 121998297
Start: 1641774
End: 1643027
Strand: Reverse
Name: 121998297
Synonym: Hhal_1515
Alternate gene names: NA
Gene position: 1643027-1641774 (Counterclockwise)
Preceding gene: 121998298
Following gene: 121998296
Centisome position: 61.34
GC content: 67.54
Gene sequence:
>1254_bases GTGGCCGAGATCCTGTTCCTGGTGCATCGCGTGCCGTGGCCGCCGAACAAGGGCGATAAGATCCGCTCTTACCATATCCT CCGTCACTTGACGGAGCGCCACCGGGTCCACCTCGGGACCTTTGTCGATGACCCGGACGATTGGCGTTTCCTCCCCGACC TGGAAGCGGTTTGCGCGAGCGTGTGCGCGCGTCCACTGCCGCGGCGGCGGGCGCAGCTGCGCGCGCTTGGCGGTTTTCTC ACTGGAGAGCCGCTGACCCTGCCCTGGTACCGGGACCGGCACCTGGCGCAGTGGGTTCGCCAGGTGTGCCAAGCGCAGCC AATCGATGTCGCGATGTGCTTCTCCTCGTCGATGGGGCCGTACGTGCCGGATCGGCCACCTTCGCTACTGCGGGTGGTGG ATTTCGTCGACATCGACTCCGATAAGTGGGGTCAGTACGCGCGCCATCGTCCCTGGCCCCTGCGGGCGGTCTTTGCCCGC GAGGCACGCCGGCTATTGGCCTACGAACGACACCTGGCGGCGTCGAGCGACGCCAGCTTGTTTGTTTCTACGGACGAGGC GGCGGCGTTCCGGAGTCTCGCGCCGGAGTCGGCGCAAAGCGTCTCGGCAATGAGTAACGGCGTGGATACGGACTACTTCG ACCCGAGGCTTCTTGGGCCGAGCCCTTACGCCGCCGACGAGCGGCCGGTGGTCCTGACGGGCGCCATGGATTATTGGCCG AACGCCGATGCGGCCTGCTGGTTCGCTGAGGAGGCCTTTCCCCAGGTCCGGGCCCGGGAGCCAGCGGCTCGGTTCTACGT GGTCGGTAATCGGCCGACGCCGGCAGTGGCTGCGCTGGCAAACCGCCCCGGGGTGACCGTCACCGGCTTTGTGGACGACG TCCGCCCCTGGGTTGGTCACGCAGCCGTGGCCGTGGCGCCGCTGCGTGTGGCCCGAGGGATCCAGAACAAGGTACTCGAG GCGATGGCCCTCGGCCGGCCGATCGTCGCTTCGCCGGAGGCCCTGGAAGGACTGCAGGTCGCCCTAGGGGTGGAAGTGGA AAGCGCCGAGGCGCAGCCGGAAGCAATGGTCGAAGCGGTCTGCCGGTGCCTGGACGGGGGCGATGGTATGGGGGCAGCTG CGCGAAGGCGCGTCGTGCAGGACTACAGTTGGGCCCGGCATCTTGGCCGGCTCGACCGGCTGCTCGCTGGCACGACCGAA CGGATTGATGACGATGAGGGACACGCGTTGAGTGAGGCAGCTGATGGCCAGTAA
Upstream 100 bases:
>100_bases CGCGGTACCGGCAAGCAATCCGCATCTGGCAGCGGTTGCCGCTTTCGGTGGTGAATCGATTGGGACCCATCGTGGTCCGG GGTCTGGGGTAGGAGGGAGC
Downstream 100 bases:
>100_bases CCCGGATGCGATTGTCGGCGGTGGGCTCGGGGATCGAGCGCCGTGGTACCTGCACGGGGCGGCATTGGCACTGCTCGGCG TGGTGCTGGCGATCGCCTTC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Sugar Transferase; Glycosyltransferase Group 1 Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MAEILFLVHRVPWPPNKGDKIRSYHILRHLTERHRVHLGTFVDDPDDWRFLPDLEAVCASVCARPLPRRRAQLRALGGFL TGEPLTLPWYRDRHLAQWVRQVCQAQPIDVAMCFSSSMGPYVPDRPPSLLRVVDFVDIDSDKWGQYARHRPWPLRAVFAR EARRLLAYERHLAASSDASLFVSTDEAAAFRSLAPESAQSVSAMSNGVDTDYFDPRLLGPSPYAADERPVVLTGAMDYWP NADAACWFAEEAFPQVRAREPAARFYVVGNRPTPAVAALANRPGVTVTGFVDDVRPWVGHAAVAVAPLRVARGIQNKVLE AMALGRPIVASPEALEGLQVALGVEVESAEAQPEAMVEAVCRCLDGGDGMGAAARRRVVQDYSWARHLGRLDRLLAGTTE RIDDDEGHALSEAADGQ
Sequences:
>Translated_417_residues MAEILFLVHRVPWPPNKGDKIRSYHILRHLTERHRVHLGTFVDDPDDWRFLPDLEAVCASVCARPLPRRRAQLRALGGFL TGEPLTLPWYRDRHLAQWVRQVCQAQPIDVAMCFSSSMGPYVPDRPPSLLRVVDFVDIDSDKWGQYARHRPWPLRAVFAR EARRLLAYERHLAASSDASLFVSTDEAAAFRSLAPESAQSVSAMSNGVDTDYFDPRLLGPSPYAADERPVVLTGAMDYWP NADAACWFAEEAFPQVRAREPAARFYVVGNRPTPAVAALANRPGVTVTGFVDDVRPWVGHAAVAVAPLRVARGIQNKVLE AMALGRPIVASPEALEGLQVALGVEVESAEAQPEAMVEAVCRCLDGGDGMGAAARRRVVQDYSWARHLGRLDRLLAGTTE RIDDDEGHALSEAADGQ >Mature_416_residues AEILFLVHRVPWPPNKGDKIRSYHILRHLTERHRVHLGTFVDDPDDWRFLPDLEAVCASVCARPLPRRRAQLRALGGFLT GEPLTLPWYRDRHLAQWVRQVCQAQPIDVAMCFSSSMGPYVPDRPPSLLRVVDFVDIDSDKWGQYARHRPWPLRAVFARE ARRLLAYERHLAASSDASLFVSTDEAAAFRSLAPESAQSVSAMSNGVDTDYFDPRLLGPSPYAADERPVVLTGAMDYWPN ADAACWFAEEAFPQVRAREPAARFYVVGNRPTPAVAALANRPGVTVTGFVDDVRPWVGHAAVAVAPLRVARGIQNKVLEA MALGRPIVASPEALEGLQVALGVEVESAEAQPEAMVEAVCRCLDGGDGMGAAARRRVVQDYSWARHLGRLDRLLAGTTER IDDDEGHALSEAADGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46038; Mature: 45906
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEILFLVHRVPWPPNKGDKIRSYHILRHLTERHRVHLGTFVDDPDDWRFLPDLEAVCAS CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHH VCARPLPRRRAQLRALGGFLTGEPLTLPWYRDRHLAQWVRQVCQAQPIDVAMCFSSSMGP HHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC YVPDRPPSLLRVVDFVDIDSDKWGQYARHRPWPLRAVFAREARRLLAYERHLAASSDASL CCCCCCHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE FVSTDEAAAFRSLAPESAQSVSAMSNGVDTDYFDPRLLGPSPYAADERPVVLTGAMDYWP EEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCC NADAACWFAEEAFPQVRAREPAARFYVVGNRPTPAVAALANRPGVTVTGFVDDVRPWVGH CCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECHHHHHHHHHH AAVAVAPLRVARGIQNKVLEAMALGRPIVASPEALEGLQVALGVEVESAEAQPEAMVEAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEEEECCCCCCHHHHHHHH CRCLDGGDGMGAAARRRVVQDYSWARHLGRLDRLLAGTTERIDDDEGHALSEAADGQ HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHCCCCC >Mature Secondary Structure AEILFLVHRVPWPPNKGDKIRSYHILRHLTERHRVHLGTFVDDPDDWRFLPDLEAVCAS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHH VCARPLPRRRAQLRALGGFLTGEPLTLPWYRDRHLAQWVRQVCQAQPIDVAMCFSSSMGP HHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC YVPDRPPSLLRVVDFVDIDSDKWGQYARHRPWPLRAVFAREARRLLAYERHLAASSDASL CCCCCCHHHHHHHHHEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE FVSTDEAAAFRSLAPESAQSVSAMSNGVDTDYFDPRLLGPSPYAADERPVVLTGAMDYWP EEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCC NADAACWFAEEAFPQVRAREPAARFYVVGNRPTPAVAALANRPGVTVTGFVDDVRPWVGH CCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEECHHHHHHHHHH AAVAVAPLRVARGIQNKVLEAMALGRPIVASPEALEGLQVALGVEVESAEAQPEAMVEAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEEEECCCCCCHHHHHHHH CRCLDGGDGMGAAARRRVVQDYSWARHLGRLDRLLAGTTERIDDDEGHALSEAADGQ HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA