Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is asnB [H]

Identifier: 121998294

GI number: 121998294

Start: 1637088

End: 1639001

Strand: Reverse

Name: asnB [H]

Synonym: Hhal_1512

Alternate gene names: 121998294

Gene position: 1639001-1637088 (Counterclockwise)

Preceding gene: 121998295

Following gene: 121998293

Centisome position: 61.19

GC content: 66.67

Gene sequence:

>1914_bases
GTGTGCGGGTTAGTCGGAATCCTGGATCACGCCCTGGAAGGCGGGCGCGCCGGCGACGAGGCGCTTTTGCGGCGCATGAC
CGAGAGCCTGGCCCACCGGGGACCGGACGATTCGAGTATCCATCAGGAGGCCGGGGTCGGGCTCGGCCACCGTCGCTTGT
CAATCATCGATCGCGCGGGGGGGCAGCAGCCGCTTGCCAATGAAGATGGCCGGGTGATCACCGTCTTCAACGGCGAGATC
TACAACCATGCCGAGCTGCGGTCGACACTGGAGCAGCGCGGGCACGACTTCGCCACGCGCTGTGATACCGAGGTCATTGT
GCACGCCTGGGAGGAGTGGGGCGAGCGTTGCGTCGAGCACTTCCGCGGGATGTTCAGCCTGGCGGTCTGGGATCGCAATG
AGCAGGCGTTATTCCTGGCCCGCGATCGGCTCGGGATCAAGCCCCTGTGCTACGCCGAACTCCCCGACGGACGGGTGCTG
TTCGCGTCCGAGATCAAGGCCCTGCTGGCCTGCGCCGAGGTGCCGAGAGACCTCGATCCGAGGGCGATCGAGGATTACTT
CGCCTACGGTTATGTGCCGGATCCGCGGAGCATCTTTGCGGCCGTACGCAAGCTGCCGCCGGGGCATACGTTATTGCTAC
GCCGCGGTGAACCGATGGGGCCCCCGCGACAGTATTGGGACGCTACGTTCGATAGCAGCTCAGATCGCTCGTTGTCGGCG
GAGCAGGCCGGCGAGGCGTTGGTCGCGCAGCTACGCGAGGCGGTGGACATCCGTCTTGAGGCCGAGGTCCCTCTGGGCGC
TTTCCTCTCCGGCGGGGTCGACTCCAGTGTCGTGGTGGCGTTGATGAGCGAACTCAGTGACCGTCCGGTGGATGCGTGCT
CCATTGCCTTCCGCGATCCGCATTACGACGAGGCGGAGCACGCCGGGAAGGTGGCCGGGCACCTGGGCCTCAACCACCAC
ATCCACAAGGTGGATTCGGAGCGTTTCGACCTGATCGACGAGTTGGCGCTGCTCTTCGACGAGCCCTTCGCCGACCCGTC
GGCTCTTCCTACCTACGAGGTCAGCCGGATCGCGCGGCAGCACGTTACGGTGGCGCTATCCGGGGACGGGGGCGATGAGG
TGCTGGCGGGGTACCGACGCTACCGCGGTTATCAGCGGGAGGCCCGGCTGCGGGGGCGGCTACCGGATGGCCTTCGACGA
GGTCTGTTCGGGTCGCTGGCCCGCTGGTACCCGAAGGCCGACTGGGCACCTAAGTACCTGCGTGGCAAGGCGACTTTCCA
GGCGCTGGCGGCGGATCCGGTGGCCGGGTATCTGCGCAGCGTCGCGGTGGTCGATGACGATCAGCGCGCCCGGCTGTTCT
CGCAGCGGTTTCAGCGCGAACTGCAGGGGTACCACGCCGCCGAGGTGCTGCGTGGCCACGCCGCCGAGGCACCGACCCAC
GACCCGCTCGCCTTTGTGCAGTACCTGGATCTCAAAACCTGGTTGCCGGGCGACATCCTGACCAAGGTGGATCGGGCAAG
CATGGCCCACGGGCTGGAGGTGCGGGTGCCGCTGCTCGATCACCGGTTCATGGAGTGGGCGGGGCGGTTGCCTACGGATC
TCAAGGTCCGCAATCAGCAGGGCAAGTGGCTCCTCAAGCGGGCCTTCGAGGATCGCCTGCCCCACGATGTCCTCTACCGC
ACCAAGCAGGGGTTCAATATGCCCATCGCGGAGTGGTTTCGCGGACCGCTGCGCCAGCGGCTCCGCGAAGCCGTGCTCGG
CAAACGGCTGATGGACAGCGGTTACTTCGATGCGAGCCGGTTGCGCACCCTGGTCGATGAACACCAGTCCGGGCGAAGCA
ATCACGCCCGTCCGCTGTGGGCCCTGCTGATGCTGGAGTCCTTCCTGCGCCGCTGTGTGGAGGGGGCGCGGTGA

Upstream 100 bases:

>100_bases
CTCGGTCGAGGCCATGGTCGGGGCTTACGAAAGTCTTTATCGCGAGCTATTGGCGCCACCGGCGCGGAGCGGCTCCGTGG
CAAGGAAGGGATAACTGCCA

Downstream 100 bases:

>100_bases
CCCCCTGGCTGGTCCGTGGGCTCCTGTTGCCCGCCCATGAGCGGCTGCGTGGCCGGGCAACCCTCGCCGAACTGGCGGCC
CTGCGTCGGGGCGAGCAGCA

Product: asparagine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI
YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL
FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA
EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH
IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR
GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH
DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR
TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR

Sequences:

>Translated_637_residues
MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI
YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL
FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA
EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH
IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR
GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH
DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR
TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR
>Mature_637_residues
MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI
YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL
FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA
EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH
IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR
GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH
DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR
TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR

Specific function: Main asparagine synthetase in vegetative cells [H]

COG id: COG0367

COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Homo sapiens, GI168229248, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI168229252, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI168229250, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI296010848, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23,
Organism=Escherichia coli, GI1786889, Length=396, Percent_Identity=31.3131313131313, Blast_Score=158, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI71993933, Length=391, Percent_Identity=28.9002557544757, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25147557, Length=391, Percent_Identity=28.9002557544757, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI25147560, Length=355, Percent_Identity=28.169014084507, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17560178, Length=395, Percent_Identity=27.0886075949367, Blast_Score=103, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321563, Length=417, Percent_Identity=26.8585131894484, Blast_Score=111, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6325403, Length=414, Percent_Identity=26.5700483091787, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI45553209, Length=409, Percent_Identity=26.8948655256724, Blast_Score=137, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006426
- InterPro:   IPR001962
- InterPro:   IPR017932
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00733 Asn_synthase [H]

EC number: =6.3.5.4 [H]

Molecular weight: Translated: 71729; Mature: 71729

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAG
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCC
GQQPLANEDGRVITVFNGEIYNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEH
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH
FRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVLFASEIKALLACAEVPRDLDP
HHHHHEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC
RAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCH
EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDP
HHHHHHHHHHHHHHHCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCC
HYDEAEHAGKVAGHLGLNHHIHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQ
CCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRRGLFGSLARWYPKADWAPKYL
HEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
RGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECCCC
GKWLLKRAFEDRLPHDVLYRTKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASR
CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAG
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCC
GQQPLANEDGRVITVFNGEIYNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEH
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH
FRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVLFASEIKALLACAEVPRDLDP
HHHHHEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC
RAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCH
EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDP
HHHHHHHHHHHHHHHCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCC
HYDEAEHAGKVAGHLGLNHHIHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQ
CCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRRGLFGSLARWYPKADWAPKYL
HEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
RGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECCCC
GKWLLKRAFEDRLPHDVLYRTKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASR
CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 8755891; 10498721 [H]