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The map label for this gene is etfB [H]

Identifier: 121998277

GI number: 121998277

Start: 1616132

End: 1616881

Strand: Reverse

Name: etfB [H]

Synonym: Hhal_1495

Alternate gene names: 121998277

Gene position: 1616881-1616132 (Counterclockwise)

Preceding gene: 121998280

Following gene: 121998276

Centisome position: 60.37

GC content: 68.27

Gene sequence:

>750_bases
ATGAAGATCCTGGTGACAGCTAAGCGGGTGATCGACTCCACCGTACGGGTGCGCGTGCGCCCCGACGGATCGGGTGTCGA
CAAGGCCCACGCCAAGATGGCGATGAATCCCTTTGACGAGACCGCCGTCGAGGAGGCAGTGCGCCTCAAGGAGGCCGGCA
AGGCCAGCGAAGTGGTGGCCGTCACCCTCGGCGATGCCGGCAGCGAGGAAGTGCTGCGCACTGCTTTGGCCTTCGGTGTC
GATCGGGCCCTGCGCGTGGAGAGCGACGAACCGCTGGAGCCCCTGGCGGTCAGCAAGGCCCTGGCCGCGCTGGTGGAGCG
CGAGCAGCCGGATCTGGTGCTGATGGGCAAGCAGGCCATCGACGACGATAGCAATCAGGTCGGCCAGATGCTGGCGCAGC
ACCTGGGCTGGGGCCAGGCCACATTTGCGTGCGCCCTGGCGGTCGGCGGCGAGGAGCTGCAGGTCACCCGCGAGGTCGAC
GGCGGGCGGCACACGGTGGCGGTGCGCCTGCCCGCGGTGGTCACCACCGAGCTGGATCTCAACCAGCCGCGCTACATTAA
GCTGCCGAACATCATGAAAGCCAAGAAGAAGCCCATCGACCGGGTGCCGCTGGCCGATCTGGGCGTGGACGGGGCGCCGC
GCCTGGAACTGCTCGGGGTCTCGGAGCCGCCGCCGCGTGCGGCCGGTGAGCGGGTCGAGAGCGTGGCCGAACTGGTTGAC
CGTCTGAAGAACGACGCGCAGGTGATTTGA

Upstream 100 bases:

>100_bases
AAGGGGGTGTGAGTTGACGCCGCGGTCAGGAGTGCGCACAGTCGACCGGGATGTTGCACCGCGGCGCGCGGACCGCGCGC
CGATCACTAGCGAGGAAGGC

Downstream 100 bases:

>100_bases
GATGAGTGTCCTGGTCTTTGCGGAACATGATGGCGCCCGGGTCACCGAGGCGACGCGACGGGCGATCAGCGCCGCCACCA
CCCTGGGCACGCCGGTCGAT

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVTAKRVIDSTVRVRVRPDGSGVDKAHAKMAMNPFDETAVEEAVRLKEAGKASEVVAVTLGDAGSEEVLRTALAFGV
DRALRVESDEPLEPLAVSKALAALVEREQPDLVLMGKQAIDDDSNQVGQMLAQHLGWGQATFACALAVGGEELQVTREVD
GGRHTVAVRLPAVVTTELDLNQPRYIKLPNIMKAKKKPIDRVPLADLGVDGAPRLELLGVSEPPPRAAGERVESVAELVD
RLKNDAQVI

Sequences:

>Translated_249_residues
MKILVTAKRVIDSTVRVRVRPDGSGVDKAHAKMAMNPFDETAVEEAVRLKEAGKASEVVAVTLGDAGSEEVLRTALAFGV
DRALRVESDEPLEPLAVSKALAALVEREQPDLVLMGKQAIDDDSNQVGQMLAQHLGWGQATFACALAVGGEELQVTREVD
GGRHTVAVRLPAVVTTELDLNQPRYIKLPNIMKAKKKPIDRVPLADLGVDGAPRLELLGVSEPPPRAAGERVESVAELVD
RLKNDAQVI
>Mature_249_residues
MKILVTAKRVIDSTVRVRVRPDGSGVDKAHAKMAMNPFDETAVEEAVRLKEAGKASEVVAVTLGDAGSEEVLRTALAFGV
DRALRVESDEPLEPLAVSKALAALVEREQPDLVLMGKQAIDDDSNQVGQMLAQHLGWGQATFACALAVGGEELQVTREVD
GGRHTVAVRLPAVVTTELDLNQPRYIKLPNIMKAKKKPIDRVPLADLGVDGAPRLELLGVSEPPPRAAGERVESVAELVD
RLKNDAQVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=51.984126984127, Blast_Score=247, Evalue=6e-66,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=51.8987341772152, Blast_Score=229, Evalue=2e-60,
Organism=Escherichia coli, GI2367123, Length=256, Percent_Identity=28.90625, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.7056277056277, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=248, Percent_Identity=52.0161290322581, Blast_Score=236, Evalue=6e-63,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=44, Blast_Score=207, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=52.191235059761, Blast_Score=228, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=52.191235059761, Blast_Score=228, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26699; Mature: 26699

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTAKRVIDSTVRVRVRPDGSGVDKAHAKMAMNPFDETAVEEAVRLKEAGKASEVVA
CEEEEEHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
VTLGDAGSEEVLRTALAFGVDRALRVESDEPLEPLAVSKALAALVEREQPDLVLMGKQAI
EEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHC
DDDSNQVGQMLAQHLGWGQATFACALAVGGEELQVTREVDGGRHTVAVRLPAVVTTELDL
CCCHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEEEEECCCCCEEEEEEECEEEEEEECC
NQPRYIKLPNIMKAKKKPIDRVPLADLGVDGAPRLELLGVSEPPPRAAGERVESVAELVD
CCCCEEECCCHHHHHCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
RLKNDAQVI
HHHCCCCCC
>Mature Secondary Structure
MKILVTAKRVIDSTVRVRVRPDGSGVDKAHAKMAMNPFDETAVEEAVRLKEAGKASEVVA
CEEEEEHHHHHCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
VTLGDAGSEEVLRTALAFGVDRALRVESDEPLEPLAVSKALAALVEREQPDLVLMGKQAI
EEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHC
DDDSNQVGQMLAQHLGWGQATFACALAVGGEELQVTREVDGGRHTVAVRLPAVVTTELDL
CCCHHHHHHHHHHHCCCCHHHHHHHHEECCCCEEEEEECCCCCEEEEEEECEEEEEEECC
NQPRYIKLPNIMKAKKKPIDRVPLADLGVDGAPRLELLGVSEPPPRAAGERVESVAELVD
CCCCEEECCCHHHHHCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
RLKNDAQVI
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]