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The map label for this gene is rnfH

Identifier: 121998265

GI number: 121998265

Start: 1604019

End: 1604312

Strand: Reverse

Name: rnfH

Synonym: Hhal_1483

Alternate gene names: 121998265

Gene position: 1604312-1604019 (Counterclockwise)

Preceding gene: 121998266

Following gene: 121998263

Centisome position: 59.9

GC content: 68.37

Gene sequence:

>294_bases
ATGTCCTCTGAGGGGGAGCTGGGGATCGAGGTCGTCTACGCGCTGCCGGGGCAGCAGACGGTGTTGCGGGTCGAGTTGCC
GGCCGGCAGCACGGCGGGAGACGCCCTGAACGCCTCCGGAGTGCTGGAGCGCCACCCGGAGATCGATCTGACGCGGCAGT
CGGTCGGCGTGTTCGGGCAGATCGTCGGTCTTGATACCCCGTTGCACAATGGTGACCGCGTAGAGGTGTACCGGCCGCTG
CAGGTGGATCCGAAAGAGGCCCGCAAGCGGCGTGCCGCCCGCAAGGCCTCCTGA

Upstream 100 bases:

>100_bases
CGGATCGTGGCCTACGCGTTCGGCAAGGTCTTCACCCAGGTCGCCAACACGCTGGTGGATAGCTTCGCCCGGAGGGCCCG
CGAGGTCTATGGAGAGCGCG

Downstream 100 bases:

>100_bases
ATGACCAGGGGCTAGCGGGATGTCCAGTGGTCTTCGATCTCGACGAGCTCATCGCCATCGAAGTGGAGCGTCAGTCGCTT
GCGGGCCTCCTGGCTGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSSEGELGIEVVYALPGQQTVLRVELPAGSTAGDALNASGVLERHPEIDLTRQSVGVFGQIVGLDTPLHNGDRVEVYRPL
QVDPKEARKRRAARKAS

Sequences:

>Translated_97_residues
MSSEGELGIEVVYALPGQQTVLRVELPAGSTAGDALNASGVLERHPEIDLTRQSVGVFGQIVGLDTPLHNGDRVEVYRPL
QVDPKEARKRRAARKAS
>Mature_96_residues
SSEGELGIEVVYALPGQQTVLRVELPAGSTAGDALNASGVLERHPEIDLTRQSVGVFGQIVGLDTPLHNGDRVEVYRPLQ
VDPKEARKRRAARKAS

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=93, Percent_Identity=47.3118279569892, Blast_Score=95, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_HALHL (A1WX38)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003052.1
- ProteinModelPortal:   A1WX38
- SMR:   A1WX38
- STRING:   A1WX38
- GeneID:   4709142
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_1483
- eggNOG:   COG2914
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- PhylomeDB:   A1WX38
- BioCyc:   HHAL349124:HHAL_1483-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 10446; Mature: 10315

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEGELGIEVVYALPGQQTVLRVELPAGSTAGDALNASGVLERHPEIDLTRQSVGVFGQ
CCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
IVGLDTPLHNGDRVEVYRPLQVDPKEARKRRAARKAS
EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSEGELGIEVVYALPGQQTVLRVELPAGSTAGDALNASGVLERHPEIDLTRQSVGVFGQ
CCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
IVGLDTPLHNGDRVEVYRPLQVDPKEARKRRAARKAS
EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA