| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is fur [H]
Identifier: 121998263
GI number: 121998263
Start: 1603195
End: 1603617
Strand: Reverse
Name: fur [H]
Synonym: Hhal_1481
Alternate gene names: 121998263
Gene position: 1603617-1603195 (Counterclockwise)
Preceding gene: 121998265
Following gene: 121998260
Centisome position: 59.87
GC content: 63.12
Gene sequence:
>423_bases GTGGACGCTGGTGGCTTGCGCAAGGCGGGGCTTAAGGTCACGTTGCCGCGGATGAAGATCCTGGAGGTGCTGCAGCAGAG CCGGCAGCGCCACGTCTCGGCCGAGGAGGTCTATCGGGCCCTGCTGGATGCCGGAGAGGACATCGGCTTGGCCACGGTCT ACCGGGTTCTGACGCAGTTCGAGACGGCAGGCATCCTGGTCCGTCATAACTTCCAGGGCAGTCACTCCGTCTTTGAGTTG AACGACACCGCCCACCACGATCACATCGTCTGCGTGGAGTGTGGTCGGGTCGAGGAGTTCGTGGACGATACCATCGAGCA GCGGCAGCGGGAGACCGCCCAAGAGTATGCCTTTCGCATGACCGGTCACTCCCTCGTGCTCTACGGCGTATGCGCCGAAT GCGCCGGTGACTCCGAATCCTGA
Upstream 100 bases:
>100_bases CGAGAACGCATAATAAGAATAACTTGCATTTGGATGGTGTCATCATAGAAGAGATGGTAGCCTAATGACCGAATCGACGA ACAGTGGGCGAGGGGAAGCT
Downstream 100 bases:
>100_bases CAGCGCGGGCGGCGGCCGACCGTGCTCGCGTCGCCCGTGCCCGCTAGCTGCCGCCGCGCTCGAGCATCCGCTCGGCCGCG GCGCGCTCGTGATCGGTGAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDAGGLRKAGLKVTLPRMKILEVLQQSRQRHVSAEEVYRALLDAGEDIGLATVYRVLTQFETAGILVRHNFQGSHSVFEL NDTAHHDHIVCVECGRVEEFVDDTIEQRQRETAQEYAFRMTGHSLVLYGVCAECAGDSES
Sequences:
>Translated_140_residues MDAGGLRKAGLKVTLPRMKILEVLQQSRQRHVSAEEVYRALLDAGEDIGLATVYRVLTQFETAGILVRHNFQGSHSVFEL NDTAHHDHIVCVECGRVEEFVDDTIEQRQRETAQEYAFRMTGHSLVLYGVCAECAGDSES >Mature_140_residues MDAGGLRKAGLKVTLPRMKILEVLQQSRQRHVSAEEVYRALLDAGEDIGLATVYRVLTQFETAGILVRHNFQGSHSVFEL NDTAHHDHIVCVECGRVEEFVDDTIEQRQRETAQEYAFRMTGHSLVLYGVCAECAGDSES
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=129, Percent_Identity=64.3410852713178, Blast_Score=180, Evalue=3e-47,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15678; Mature: 15678
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAGGLRKAGLKVTLPRMKILEVLQQSRQRHVSAEEVYRALLDAGEDIGLATVYRVLTQF CCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ETAGILVRHNFQGSHSVFELNDTAHHDHIVCVECGRVEEFVDDTIEQRQRETAQEYAFRM HHCCEEEEECCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH TGHSLVLYGVCAECAGDSES CCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDAGGLRKAGLKVTLPRMKILEVLQQSRQRHVSAEEVYRALLDAGEDIGLATVYRVLTQF CCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ETAGILVRHNFQGSHSVFELNDTAHHDHIVCVECGRVEEFVDDTIEQRQRETAQEYAFRM HHCCEEEEECCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH TGHSLVLYGVCAECAGDSES CCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200525 [H]