| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is thrH
Identifier: 121998172
GI number: 121998172
Start: 1501421
End: 1502029
Strand: Reverse
Name: thrH
Synonym: Hhal_1390
Alternate gene names: NA
Gene position: 1502029-1501421 (Counterclockwise)
Preceding gene: 121998174
Following gene: 121998171
Centisome position: 56.08
GC content: 66.34
Gene sequence:
>609_bases TTGAACATCGTCTGTCTCGATCTCGAGGGCGTGCTGGTTCCGGAGATCTGGATCAACCTCGCCGATATCACCGGTATCGA CGCCTTCCGTGCCACGACGCGCGACGTGCCGGACTACAACGAGCTGATGACCATGCGCCTGGCGGACATGGACAGGCATG GCCTGGGGCTGGCCGACATCCAGTCCGTGGTCGCCCGGCTCGAGCCGTTGTCGGGCGCCCGGGAGTTCCTCGATGGCCTG CGCGCCGATTACCAGGTCATCATCCTCTCCGATACCTTCTACGAGTTCGCGCGGCCGCTGATGGCCCAGCTCGGCTGGCC GACGCTGTTCTGCCACAGCCTCGAGGTGACCGAGACGGGCCGGATTGCCGACTTCCACATCCGCCTGGCCGATCACAAGC GTCAGGCCGTGGAGTCGCTGCGCGGGCTCAACTTCCGTGTGGCCGCTGCGGGCGACTCCTACAACGACACGCGGATGCTC GGCGCAGCCGACCAGGGCATCTTCTTCTGCCCGCCTGCGGAGATCGCCGAGCAGTTCCCGCAGTTCCCCGTTACCCACGA TTACGGCGCCCTGCGCCAGGCCTTGGACCAGGCCTTCGCACGCGCCTGA
Upstream 100 bases:
>100_bases TTTCGCTTGCACCCGGCATCCATTATGAATAGATTGGCGGCGCATTCGCGCCGACCGGGGCTGAGCGCGCCCGGGAAACG CTCGCCAGGAGGACAATCGC
Downstream 100 bases:
>100_bases TCGCGACCGCCCTGCGTCAGGGAAGGGGTCTCCATGCGAGTAGGTATCATCGCCGATACCCACGGCTTCCTCGACCCGCG CATCGCCGACCACATCGCCG
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: Homoserine Kinase; Phosphoserine Phosphatase/Homoserine Phosphotransferase; Hydrolase Haloacid Dehalogenase-Like Family
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNIVCLDLEGVLVPEIWINLADITGIDAFRATTRDVPDYNELMTMRLADMDRHGLGLADIQSVVARLEPLSGAREFLDGL RADYQVIILSDTFYEFARPLMAQLGWPTLFCHSLEVTETGRIADFHIRLADHKRQAVESLRGLNFRVAAAGDSYNDTRML GAADQGIFFCPPAEIAEQFPQFPVTHDYGALRQALDQAFARA
Sequences:
>Translated_202_residues MNIVCLDLEGVLVPEIWINLADITGIDAFRATTRDVPDYNELMTMRLADMDRHGLGLADIQSVVARLEPLSGAREFLDGL RADYQVIILSDTFYEFARPLMAQLGWPTLFCHSLEVTETGRIADFHIRLADHKRQAVESLRGLNFRVAAAGDSYNDTRML GAADQGIFFCPPAEIAEQFPQFPVTHDYGALRQALDQAFARA >Mature_202_residues MNIVCLDLEGVLVPEIWINLADITGIDAFRATTRDVPDYNELMTMRLADMDRHGLGLADIQSVVARLEPLSGAREFLDGL RADYQVIILSDTFYEFARPLMAQLGWPTLFCHSLEVTETGRIADFHIRLADHKRQAVESLRGLNFRVAAAGDSYNDTRML GAADQGIFFCPPAEIAEQFPQFPVTHDYGALRQALDQAFARA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22575; Mature: 22575
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVCLDLEGVLVPEIWINLADITGIDAFRATTRDVPDYNELMTMRLADMDRHGLGLADI CCEEEEECCCEEHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHH QSVVARLEPLSGAREFLDGLRADYQVIILSDTFYEFARPLMAQLGWPTLFCHSLEVTETG HHHHHHHCCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCHHHEEEEEEECCCC RIADFHIRLADHKRQAVESLRGLNFRVAAAGDSYNDTRMLGAADQGIFFCPPAEIAEQFP CEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCEEECCCHHHHHHCC QFPVTHDYGALRQALDQAFARA CCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNIVCLDLEGVLVPEIWINLADITGIDAFRATTRDVPDYNELMTMRLADMDRHGLGLADI CCEEEEECCCEEHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHH QSVVARLEPLSGAREFLDGLRADYQVIILSDTFYEFARPLMAQLGWPTLFCHSLEVTETG HHHHHHHCCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCHHHEEEEEEECCCC RIADFHIRLADHKRQAVESLRGLNFRVAAAGDSYNDTRMLGAADQGIFFCPPAEIAEQFP CEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCEEECCCHHHHHHCC QFPVTHDYGALRQALDQAFARA CCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA