Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998159

Identifier: 121998159

GI number: 121998159

Start: 1485455

End: 1485913

Strand: Reverse

Name: 121998159

Synonym: Hhal_1377

Alternate gene names: NA

Gene position: 1485913-1485455 (Counterclockwise)

Preceding gene: 121998160

Following gene: 121998158

Centisome position: 55.48

GC content: 70.15

Gene sequence:

>459_bases
GTGGCTGAACTGCTGGAACAGGTTCGCGCCGCCCGTGCCGCCGGCGATTACGAACGCCTCACCGACCTGGTGCCCTACGC
CCGCTTGATCGGCATGCGCTTCGAGGCGTGCCCCGAGGGCGAAGGCCTGTGCATCCGCCTGCCGTACCGGGACGATCTCA
TTGGCCGGCCGGGCAGCGGCTCGCTGCACGGCGGGCTGCTGGGGGCCTTCCTGGAGCACGGCGCGATCATGCAGATCCTC
TGGGAGGGGCAGAGCTGCTATCTGCCGCGCATCATCAACTTCCACGTCGACTACCTGCGCCGCGGGGCGCAGGAGACTAC
CTACGCCGCCGTGGAGATCCGACGTCAGGGGCGCCGCGTGGCCAACGTCCACGCCAGCGCCTGGCAGTCGGATCCCAAGC
GTCCCATCGCTGCGGCGCGGGGGCACTTCCTGCTGACACCGCCGGAGGGGACCGACTGA

Upstream 100 bases:

>100_bases
GAGGTGGCCTTCGCCCGGGCCGTCGCCTACGAGGATGACCCGGCGGAGCCCTTCGCTACCAGCATGAGCGCCTTCATGCG
CCTGCGCGAGGGGGTGGGGC

Downstream 100 bases:

>100_bases
TATGACCGAGTCGACGCCGCAGCCGCCCCGGGCCGCCGAGACCCCCGAGGTGATCGAACGCTTCGGGGTGCGCCGCACCG
ACCCCTACGCCTGGTTGCGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MAELLEQVRAARAAGDYERLTDLVPYARLIGMRFEACPEGEGLCIRLPYRDDLIGRPGSGSLHGGLLGAFLEHGAIMQIL
WEGQSCYLPRIINFHVDYLRRGAQETTYAAVEIRRQGRRVANVHASAWQSDPKRPIAAARGHFLLTPPEGTD

Sequences:

>Translated_152_residues
MAELLEQVRAARAAGDYERLTDLVPYARLIGMRFEACPEGEGLCIRLPYRDDLIGRPGSGSLHGGLLGAFLEHGAIMQIL
WEGQSCYLPRIINFHVDYLRRGAQETTYAAVEIRRQGRRVANVHASAWQSDPKRPIAAARGHFLLTPPEGTD
>Mature_151_residues
AELLEQVRAARAAGDYERLTDLVPYARLIGMRFEACPEGEGLCIRLPYRDDLIGRPGSGSLHGGLLGAFLEHGAIMQILW
EGQSCYLPRIINFHVDYLRRGAQETTYAAVEIRRQGRRVANVHASAWQSDPKRPIAAARGHFLLTPPEGTD

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16898; Mature: 16766

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLEQVRAARAAGDYERLTDLVPYARLIGMRFEACPEGEGLCIRLPYRDDLIGRPGSG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCEEEECCCCCCCCCCCCCC
SLHGGLLGAFLEHGAIMQILWEGQSCYLPRIINFHVDYLRRGAQETTYAAVEIRRQGRRV
CCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
ANVHASAWQSDPKRPIAAARGHFLLTPPEGTD
HHHHHHHHCCCCCCCHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
AELLEQVRAARAAGDYERLTDLVPYARLIGMRFEACPEGEGLCIRLPYRDDLIGRPGSG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHCCCCCCCCEEEECCCCCCCCCCCCCC
SLHGGLLGAFLEHGAIMQILWEGQSCYLPRIINFHVDYLRRGAQETTYAAVEIRRQGRRV
CCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
ANVHASAWQSDPKRPIAAARGHFLLTPPEGTD
HHHHHHHHCCCCCCCHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA