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The map label for this gene is IS1086 [H]

Identifier: 121998073

GI number: 121998073

Start: 1398776

End: 1399327

Strand: Reverse

Name: IS1086 [H]

Synonym: Hhal_1286

Alternate gene names: 121998073

Gene position: 1399327-1398776 (Counterclockwise)

Preceding gene: 121998079

Following gene: 121998071

Centisome position: 52.24

GC content: 67.39

Gene sequence:

>552_bases
GTGGGCAAGACCAGATGGCTGTATCGCTACGTCCTGGACCGGCTGTGCTACTGGCAGTGGTCTCCCGAGCAGATCGCCGG
CAGACTGGCGCGTATGAACCCCGAGGATCCTGAGGCTCGCGTCAGCCACGAGACCATCTACGCGGCGATCTATGCCCATC
CCAAGGGCTCGCTCAAGCAGGAGCTGATCCGGGCGCTTCGCCGCCAGAAACCGCAGCGCGGGCAACGGCGGCGCACGGCC
GCGCGAGGCGGCTCGATCGCCCCGGAGCACCTGCGCATCGCCTATCGGCCTGAAGAGATCGAGCAGCGGCTGATGCCCGG
CCACTGGGAGGGCGACCTGATCAAGGGCGCCTACAACCGCTCCTCGGTCGGCACGCTGGTTGAGCGCAAGACCCGCTACG
TCGTACTGAGCAAGATGCACGACGGTACCGCCGAGGCCGCCCTGGAGGGCTTCCATCGGCAGATGAGGCGCCTGCCGGCA
ATCCTGCGTCAGAGTCTGACTACGACCGGGGCAGCGAGATGGCCTGCCATGAGCGGCTTGCCCGGCGGTTGA

Upstream 100 bases:

>100_bases
GCGTGTGCGCTTGGACTTCGCCTTGGTCTTGCTCATCTGAGTAGCTTGCCTCGTCATGGATCACCTCGTCGAATGGTAGC
TATTGAGGTGTCCACGGTTG

Downstream 100 bases:

>100_bases
ATCTGTCGATCTGGTTCGCCGATGCGCACGCGCCCTGGCAGCGTGGCAGCAACGAGAACACCAACGGCCTGCTGCGCCAG
TACCTGCCCAAGGGCGCCGA

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MGKTRWLYRYVLDRLCYWQWSPEQIAGRLARMNPEDPEARVSHETIYAAIYAHPKGSLKQELIRALRRQKPQRGQRRRTA
ARGGSIAPEHLRIAYRPEEIEQRLMPGHWEGDLIKGAYNRSSVGTLVERKTRYVVLSKMHDGTAEAALEGFHRQMRRLPA
ILRQSLTTTGAARWPAMSGLPGG

Sequences:

>Translated_183_residues
MGKTRWLYRYVLDRLCYWQWSPEQIAGRLARMNPEDPEARVSHETIYAAIYAHPKGSLKQELIRALRRQKPQRGQRRRTA
ARGGSIAPEHLRIAYRPEEIEQRLMPGHWEGDLIKGAYNRSSVGTLVERKTRYVVLSKMHDGTAEAALEGFHRQMRRLPA
ILRQSLTTTGAARWPAMSGLPGG
>Mature_182_residues
GKTRWLYRYVLDRLCYWQWSPEQIAGRLARMNPEDPEARVSHETIYAAIYAHPKGSLKQELIRALRRQKPQRGQRRRTAA
RGGSIAPEHLRIAYRPEEIEQRLMPGHWEGDLIKGAYNRSSVGTLVERKTRYVVLSKMHDGTAEAALEGFHRQMRRLPAI
LRQSLTTTGAARWPAMSGLPGG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=163, Percent_Identity=36.8098159509202, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790736, Length=163, Percent_Identity=36.8098159509202, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI1787671, Length=163, Percent_Identity=36.8098159509202, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 21000; Mature: 20868

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTRWLYRYVLDRLCYWQWSPEQIAGRLARMNPEDPEARVSHETIYAAIYAHPKGSLKQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCHHH
ELIRALRRQKPQRGQRRRTAARGGSIAPEHLRIAYRPEEIEQRLMPGHWEGDLIKGAYNR
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHEEEECHHHHHHHHCCCCCCCCHHHCCCCC
SSVGTLVERKTRYVVLSKMHDGTAEAALEGFHRQMRRLPAILRQSLTTTGAARWPAMSGL
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGG
CCC
>Mature Secondary Structure 
GKTRWLYRYVLDRLCYWQWSPEQIAGRLARMNPEDPEARVSHETIYAAIYAHPKGSLKQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCHHH
ELIRALRRQKPQRGQRRRTAARGGSIAPEHLRIAYRPEEIEQRLMPGHWEGDLIKGAYNR
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHEEEECHHHHHHHHCCCCCCCCHHHCCCCC
SSVGTLVERKTRYVVLSKMHDGTAEAALEGFHRQMRRLPAILRQSLTTTGAARWPAMSGL
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]