Click here to switch to the map view.

The map label for this gene is 121998071

Identifier: 121998071

GI number: 121998071

Start: 1394720

End: 1395961

Strand: Reverse

Name: 121998071

Synonym: Hhal_1282

Alternate gene names: NA

Gene position: 1395961-1394720 (Counterclockwise)

Preceding gene: 121998073

Following gene: 121998066

Centisome position: 52.12

GC content: 70.13

Gene sequence:

>1242_bases
ATGGCCCTGTTTAATCTCGGCACGAAGGACGCTTACGGCAAGCAGCGGCGCGTCGAGCACCGCGGCAAGTACCTGCGGGC
CAGTCGCACCGGCGGCGTGGCGCTGCGCGCCCAGGCCCGGGCGGCGGGCGTGGATCTTACCGCCAACACCCGGCGCGGCG
TCCGGGCTTCGGTAACGCCGGCGAAGAACACCCAGGTGGCCCTGCAGAACGGACGGTTCATCCTGCGCGGTCGCTACGGG
AAGGGGCCAACCAAGCTGAACCTCTCCAAGAGCGGCGCGACGGTCTCCACGCGCAATCGGCTCGGCTCGTTCAACTGGCT
CAAGCCCAACCGCTCCTCGGCGAAGCCCTTCGGCGTCCAGGTCCGGGGGCAGAAGGCGGCGCAGCTGCAGCTGATCTACA
TGGTCGTCGCTGCCATCGTCGGGGCGGTGCAGCTGCTCTTGATGCTCATTGGCGGGCTGCTGCGCGGCGCCATCGCCCTC
GGCCAGTGGGTCGGTGACAACGTGCACGCCCTGCCGCGGTGGTGGCGCAATGCCTGGCTGCGCCGACAGCGCCGGCGGAT
CGACGAGGCTGTCGAGCAGGCGATCAACCGCTGGGACGCGGACCGGCTCAGCGCCTCCTTCGCCCTGGCGGTGGCCGTCT
GGGGGCGGGGTGAGGCGCTGCAGGACGGCCAGCGGACGTACCGACGGGTCACCGAGAAGACGGGATGGGTCGCGCTCCCG
CGCTCCCCGGAGGTCTTCGCCGAGGCGGCCCAGGGACTTGAACATTGCCGCGCCGCCGTTCAGCCGAGGGAGGATGCGCA
CCGGATCCTGATCGCGCTGCTCGCCGAAGTGGCGGCCGAGAAACTGGAGGGGTCCCGGCGGGCGGCACTGCTCTTTGAGG
CCGATGACCTGGCCCTGATCCAGGGCCCACGGACGGTGCTCCAGGAGCAGATGCTGGAGATCTTCGCTGATCACGCCCAG
CTACAGATCGAGCCGGCCCGGCCGGTGGATGAGGCCTCGAAGCCATCCTCAGCGCGGTCGGCTCGTGGTGCACCGGGGGC
GGGGCAGGGCGACGAGCCGACGGGGCGCATCGACCTCAACACGGCCTCCATCGAAGAACTCCAGGCGATCCCCCACATCG
GCCCGGAGCGCGCCGAGGCGATCGTCGCCCTGAGACCGATCCGGCGGATCGAGCAGCTTGAGGAAGTCGACGGGATCGGC
ACGAGCCGCCTGGCGGAGATCGTCGATCAGGTGAAGGTGTGA

Upstream 100 bases:

>100_bases
AGGATGGTCTCCGAATGCGACGACAGATGGTGTCGCGGGGGTGGTGTAGAAGGGCATGCCCGCCGCTATAGCGGATGACG
GCACACCGGTGAGGAGCGTG

Downstream 100 bases:

>100_bases
GTGGGCGCGGGAGGAGCGTGCCGCGGCGGTAGAACTGAGATCCCCTTTCCACAAAACCTGTGGAAAACCGTGTGGAGAAC
GTCGACCGAAGCCTTGCCAT

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MALFNLGTKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVDLTANTRRGVRASVTPAKNTQVALQNGRFILRGRYG
KGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKPFGVQVRGQKAAQLQLIYMVVAAIVGAVQLLLMLIGGLLRGAIAL
GQWVGDNVHALPRWWRNAWLRRQRRRIDEAVEQAINRWDADRLSASFALAVAVWGRGEALQDGQRTYRRVTEKTGWVALP
RSPEVFAEAAQGLEHCRAAVQPREDAHRILIALLAEVAAEKLEGSRRAALLFEADDLALIQGPRTVLQEQMLEIFADHAQ
LQIEPARPVDEASKPSSARSARGAPGAGQGDEPTGRIDLNTASIEELQAIPHIGPERAEAIVALRPIRRIEQLEEVDGIG
TSRLAEIVDQVKV

Sequences:

>Translated_413_residues
MALFNLGTKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVDLTANTRRGVRASVTPAKNTQVALQNGRFILRGRYG
KGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKPFGVQVRGQKAAQLQLIYMVVAAIVGAVQLLLMLIGGLLRGAIAL
GQWVGDNVHALPRWWRNAWLRRQRRRIDEAVEQAINRWDADRLSASFALAVAVWGRGEALQDGQRTYRRVTEKTGWVALP
RSPEVFAEAAQGLEHCRAAVQPREDAHRILIALLAEVAAEKLEGSRRAALLFEADDLALIQGPRTVLQEQMLEIFADHAQ
LQIEPARPVDEASKPSSARSARGAPGAGQGDEPTGRIDLNTASIEELQAIPHIGPERAEAIVALRPIRRIEQLEEVDGIG
TSRLAEIVDQVKV
>Mature_412_residues
ALFNLGTKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVDLTANTRRGVRASVTPAKNTQVALQNGRFILRGRYGK
GPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKPFGVQVRGQKAAQLQLIYMVVAAIVGAVQLLLMLIGGLLRGAIALG
QWVGDNVHALPRWWRNAWLRRQRRRIDEAVEQAINRWDADRLSASFALAVAVWGRGEALQDGQRTYRRVTEKTGWVALPR
SPEVFAEAAQGLEHCRAAVQPREDAHRILIALLAEVAAEKLEGSRRAALLFEADDLALIQGPRTVLQEQMLEIFADHAQL
QIEPARPVDEASKPSSARSARGAPGAGQGDEPTGRIDLNTASIEELQAIPHIGPERAEAIVALRPIRRIEQLEEVDGIGT
SRLAEIVDQVKV

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45229; Mature: 45098

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFNLGTKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVDLTANTRRGVRASVTP
CCEECCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHHCCCCEECCCCCCCEEECCC
AKNTQVALQNGRFILRGRYGKGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKPFGVQ
CCCCEEEEECCCEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEE
VRGQKAAQLQLIYMVVAAIVGAVQLLLMLIGGLLRGAIALGQWVGDNVHALPRWWRNAWL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRQRRRIDEAVEQAINRWDADRLSASFALAVAVWGRGEALQDGQRTYRRVTEKTGWVALP
HHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCEEECC
RSPEVFAEAAQGLEHCRAAVQPREDAHRILIALLAEVAAEKLEGSRRAALLFEADDLALI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
QGPRTVLQEQMLEIFADHAQLQIEPARPVDEASKPSSARSARGAPGAGQGDEPTGRIDLN
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECC
TASIEELQAIPHIGPERAEAIVALRPIRRIEQLEEVDGIGTSRLAEIVDQVKV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ALFNLGTKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVDLTANTRRGVRASVTP
CEECCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEHHHHCCCCEECCCCCCCEEECCC
AKNTQVALQNGRFILRGRYGKGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKPFGVQ
CCCCEEEEECCCEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEE
VRGQKAAQLQLIYMVVAAIVGAVQLLLMLIGGLLRGAIALGQWVGDNVHALPRWWRNAWL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRQRRRIDEAVEQAINRWDADRLSASFALAVAVWGRGEALQDGQRTYRRVTEKTGWVALP
HHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCEEECC
RSPEVFAEAAQGLEHCRAAVQPREDAHRILIALLAEVAAEKLEGSRRAALLFEADDLALI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
QGPRTVLQEQMLEIFADHAQLQIEPARPVDEASKPSSARSARGAPGAGQGDEPTGRIDLN
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECC
TASIEELQAIPHIGPERAEAIVALRPIRRIEQLEEVDGIGTSRLAEIVDQVKV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA