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The map label for this gene is yccY [C]

Identifier: 121998033

GI number: 121998033

Start: 1350003

End: 1350491

Strand: Reverse

Name: yccY [C]

Synonym: Hhal_1243

Alternate gene names: 121998033

Gene position: 1350491-1350003 (Counterclockwise)

Preceding gene: 121998034

Following gene: 121998031

Centisome position: 50.42

GC content: 63.8

Gene sequence:

>489_bases
ATGTCCGAGGACAAACTGCGTGTGCTGCTCGTCTGCATGGGCAATATCTGTCGATCGCCAACGGCGGAGGGTGTGCTGCG
CCAACGCCTGCGCGAGGAGGGGATCGAGCAGCTGGTAGAGCTCGATTCAGCGGGTACCCACGACTTCCACACCGGCAAGA
GTCCAGACCAGCGCGCCCAGATGGCAGCGCAGCGGCGGGGGATCGATATCAGCGATCTGCGCGCCCGGCAGGTGGAGCGT
CACGATTTCGAGGCCTACGATCTGATCCTGGCGATGGATGAGGCCAATCTGGGCATCCTGCAGGCCGACTGCCCGCCGAA
GCATGCCCACAAGATCGGGCTATTCCTCGATTACGCGCGCGACCGCAGTGAACGGGAGGTGCCGGATCCTTACTACGGTG
GCGAGCGGGGTTTTGAGCACGTCCTCGACCTGATCCAGGAAGCTGCCGATGGACTGATCGCCGAGGTCCGTCAGCGCCAG
CAGCGCTGA

Upstream 100 bases:

>100_bases
GGCCGCCACCGACCAGCGCCCGGGGCCGGGTGTCGATACGCCGGCCGATCTCGAGGCGGTAGCCCGGCGGCTGCAATCAA
CCCGATAAGGAAATGGTGTT

Downstream 100 bases:

>100_bases
ACCGCTCCTGCGGGCGGCGAGGTGCCGCCCGCAGGGCTTCTCTTCTACCAGCCGGTCTTACTCGGCCCTCTCCGCATCTT
CCGCATTGACCGAAGCGCCA

Product: protein tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSEDKLRVLLVCMGNICRSPTAEGVLRQRLREEGIEQLVELDSAGTHDFHTGKSPDQRAQMAAQRRGIDISDLRARQVER
HDFEAYDLILAMDEANLGILQADCPPKHAHKIGLFLDYARDRSEREVPDPYYGGERGFEHVLDLIQEAADGLIAEVRQRQ
QR

Sequences:

>Translated_162_residues
MSEDKLRVLLVCMGNICRSPTAEGVLRQRLREEGIEQLVELDSAGTHDFHTGKSPDQRAQMAAQRRGIDISDLRARQVER
HDFEAYDLILAMDEANLGILQADCPPKHAHKIGLFLDYARDRSEREVPDPYYGGERGFEHVLDLIQEAADGLIAEVRQRQ
QR
>Mature_161_residues
SEDKLRVLLVCMGNICRSPTAEGVLRQRLREEGIEQLVELDSAGTHDFHTGKSPDQRAQMAAQRRGIDISDLRARQVERH
DFEAYDLILAMDEANLGILQADCPPKHAHKIGLFLDYARDRSEREVPDPYYGGERGFEHVLDLIQEAADGLIAEVRQRQQ
R

Specific function: Unknown

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI4757714, Length=136, Percent_Identity=40.4411764705882, Blast_Score=99, Evalue=1e-21,
Organism=Homo sapiens, GI6005988, Length=136, Percent_Identity=38.9705882352941, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI96304457, Length=92, Percent_Identity=40.2173913043478, Blast_Score=70, Evalue=9e-13,
Organism=Escherichia coli, GI87081812, Length=143, Percent_Identity=32.8671328671329, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788375, Length=142, Percent_Identity=35.2112676056338, Blast_Score=68, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325330, Length=144, Percent_Identity=31.9444444444444, Blast_Score=99, Evalue=5e-22,
Organism=Drosophila melanogaster, GI78706770, Length=157, Percent_Identity=35.031847133758, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI78706772, Length=157, Percent_Identity=35.031847133758, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI78706766, Length=156, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI78706768, Length=156, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI78706764, Length=126, Percent_Identity=34.9206349206349, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI78711846, Length=149, Percent_Identity=32.2147651006711, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 18436; Mature: 18305

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKLRVLLVCMGNICRSPTAEGVLRQRLREEGIEQLVELDSAGTHDFHTGKSPDQRAQ
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
MAAQRRGIDISDLRARQVERHDFEAYDLILAMDEANLGILQADCPPKHAHKIGLFLDYAR
HHHHHCCCCHHHHHHHHHHHHCCHHHHHEEEECCCCCCEEECCCCHHHHHHHHHHHHHHH
DRSEREVPDPYYGGERGFEHVLDLIQEAADGLIAEVRQRQQR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEDKLRVLLVCMGNICRSPTAEGVLRQRLREEGIEQLVELDSAGTHDFHTGKSPDQRAQ
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
MAAQRRGIDISDLRARQVERHDFEAYDLILAMDEANLGILQADCPPKHAHKIGLFLDYAR
HHHHHCCCCHHHHHHHHHHHHCCHHHHHEEEECCCCCCEEECCCCHHHHHHHHHHHHHHH
DRSEREVPDPYYGGERGFEHVLDLIQEAADGLIAEVRQRQQR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]