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The map label for this gene is yibP [H]

Identifier: 121998001

GI number: 121998001

Start: 1315484

End: 1316632

Strand: Reverse

Name: yibP [H]

Synonym: Hhal_1211

Alternate gene names: 121998001

Gene position: 1316632-1315484 (Counterclockwise)

Preceding gene: 121998005

Following gene: 121998000

Centisome position: 49.16

GC content: 68.93

Gene sequence:

>1149_bases
ATGGCCGCGAGGCGACGGCTGATCACGGGCCCAATGTTCGGCGTCGTGCTGATGGCGCTGGCCGGGGGGGTGTCGGCGGA
CTACGAGCGCGAGCGCGAACAGCTCGAGGCCCTGCGTGATGATCTGGAGGCGATCCAGGAGGATCTCGCCGCCGACCGTG
CCGCGCGCGATGAGGTCGAGGAGGCGCTGTCGCAGCTCGAACGCCAGGTCTCCGAGGCCACTCGCGAGCTGGAGCGCCTG
CGCGCGGAGCGTGCCGAAGCCCGGGGCCGCGTGGCCGAGTTGCGCGAGGATTATGCCGAGGAGGCCGAGCGCCTGGGCCG
CCACCGCGAGACCCTGGCCGAGCAGATCGTCGCCGCCTACGTCAGTGGCGGCGACGATCCGTTGCGTCTGCTGCTCAACC
AACAGGATCCGGCCGGCGCCCAGCGTCTTTTGGTCTACCACGACTATTTCAACGAGGCGCGGGCCGGACACATTGAGGCG
GCCATGGCCGAACTGGAGAGCCTGGCCGCCCTGCGCGAGGAGCTTCGGGAAGAACTCGCTGAGCTTGAACGTCTGGAGGA
AGCGACCCGGGAAGAGCGTGAATCCTTGGCCGAACAGCGCGCCGAGCGTGACGCCCGGCGCGAGGAGCTGGAGGCGCGGA
TTGCCGAGCGGGATGCCGAGGCGGAGTCCCTGGAGGCCGAAGTGGCCGAGCAGGAAGCGCTGCTTGAGGATCTGCGTCAG
CGGCTGGCGGACGTGCCCGACGAGGCGGCTGAGGTGGAGGCCTTTGGCGAATCCCGGGGCAACCTGCCGTGGCCGGTGGA
TGGCGAAGTGGACGAGTCGTTTGGTGAAGCCCGCGGCGGCGGACTGGAGCGCACCGGCGTGGTGATCGCCGCCGAGACCG
GGGACGAGGTGCACGCGGTGGCGCCAGGCCGTGTGGTCTTTAGTGATTGGTTGCGTGGCCTGGGACTGCTGGCCATTATT
GACCACGGCGATGGCTATCTCACGCTCTACGGCCACACCGAGTCGCTGTATGTGGACGTCGGAGAGTGGGTGGAGGCCGG
TGATCTGGTGGCCACCGTGGGCAACAGCGGCAGCCGCCGGGATGCCGGGCTGTACTTCGAGATCCGCGAGGGTGCCGAGC
CACGCAACCCGCTGAATTGGCTACGCTGA

Upstream 100 bases:

>100_bases
ATCAAGCCGGGGATGATACCAGCCGTCCGCGGTGCCTGCAGGTCTGAGCGGCGTGATCGCGGTACCATGGGCGCCTGGTG
GCAAGGCAGTGGAGAGGGGC

Downstream 100 bases:

>100_bases
GTACGCCCGCCCAATGAAGGAGCTGCGATGCAATCCTGGAGCCTGACCCTGGCCGCCGCCCTGCTTGCGCTGTTCGTCGG
CCCGGCCGTCGCCGATTCGC

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MAARRRLITGPMFGVVLMALAGGVSADYEREREQLEALRDDLEAIQEDLAADRAARDEVEEALSQLERQVSEATRELERL
RAERAEARGRVAELREDYAEEAERLGRHRETLAEQIVAAYVSGGDDPLRLLLNQQDPAGAQRLLVYHDYFNEARAGHIEA
AMAELESLAALREELREELAELERLEEATREERESLAEQRAERDARREELEARIAERDAEAESLEAEVAEQEALLEDLRQ
RLADVPDEAAEVEAFGESRGNLPWPVDGEVDESFGEARGGGLERTGVVIAAETGDEVHAVAPGRVVFSDWLRGLGLLAII
DHGDGYLTLYGHTESLYVDVGEWVEAGDLVATVGNSGSRRDAGLYFEIREGAEPRNPLNWLR

Sequences:

>Translated_382_residues
MAARRRLITGPMFGVVLMALAGGVSADYEREREQLEALRDDLEAIQEDLAADRAARDEVEEALSQLERQVSEATRELERL
RAERAEARGRVAELREDYAEEAERLGRHRETLAEQIVAAYVSGGDDPLRLLLNQQDPAGAQRLLVYHDYFNEARAGHIEA
AMAELESLAALREELREELAELERLEEATREERESLAEQRAERDARREELEARIAERDAEAESLEAEVAEQEALLEDLRQ
RLADVPDEAAEVEAFGESRGNLPWPVDGEVDESFGEARGGGLERTGVVIAAETGDEVHAVAPGRVVFSDWLRGLGLLAII
DHGDGYLTLYGHTESLYVDVGEWVEAGDLVATVGNSGSRRDAGLYFEIREGAEPRNPLNWLR
>Mature_381_residues
AARRRLITGPMFGVVLMALAGGVSADYEREREQLEALRDDLEAIQEDLAADRAARDEVEEALSQLERQVSEATRELERLR
AERAEARGRVAELREDYAEEAERLGRHRETLAEQIVAAYVSGGDDPLRLLLNQQDPAGAQRLLVYHDYFNEARAGHIEAA
MAELESLAALREELREELAELERLEEATREERESLAEQRAERDARREELEARIAERDAEAESLEAEVAEQEALLEDLRQR
LADVPDEAAEVEAFGESRGNLPWPVDGEVDESFGEARGGGLERTGVVIAAETGDEVHAVAPGRVVFSDWLRGLGLLAIID
HGDGYLTLYGHTESLYVDVGEWVEAGDLVATVGNSGSRRDAGLYFEIREGAEPRNPLNWLR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=397, Percent_Identity=31.4861460957179, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=41.1764705882353, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87082174, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 42535; Mature: 42404

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARRRLITGPMFGVVLMALAGGVSADYEREREQLEALRDDLEAIQEDLAADRAARDEVE
CCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALSQLERQVSEATRELERLRAERAEARGRVAELREDYAEEAERLGRHRETLAEQIVAAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGGDDPLRLLLNQQDPAGAQRLLVYHDYFNEARAGHIEAAMAELESLAALREELREELA
HCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELERLEEATREERESLAEQRAERDARREELEARIAERDAEAESLEAEVAEQEALLEDLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RLADVPDEAAEVEAFGESRGNLPWPVDGEVDESFGEARGGGLERTGVVIAAETGDEVHAV
HHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEC
APGRVVFSDWLRGLGLLAIIDHGDGYLTLYGHTESLYVDVGEWVEAGDLVATVGNSGSRR
CCCHHHHHHHHHHCCEEEEEECCCCEEEEEECCCEEEEEHHHHHHHCCCEEECCCCCCCC
DAGLYFEIREGAEPRNPLNWLR
CCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AARRRLITGPMFGVVLMALAGGVSADYEREREQLEALRDDLEAIQEDLAADRAARDEVE
CCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALSQLERQVSEATRELERLRAERAEARGRVAELREDYAEEAERLGRHRETLAEQIVAAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGGDDPLRLLLNQQDPAGAQRLLVYHDYFNEARAGHIEAAMAELESLAALREELREELA
HCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELERLEEATREERESLAEQRAERDARREELEARIAERDAEAESLEAEVAEQEALLEDLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RLADVPDEAAEVEAFGESRGNLPWPVDGEVDESFGEARGGGLERTGVVIAAETGDEVHAV
HHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEC
APGRVVFSDWLRGLGLLAIIDHGDGYLTLYGHTESLYVDVGEWVEAGDLVATVGNSGSRR
CCCHHHHHHHHHHCCEEEEEECCCCEEEEEECCCEEEEEHHHHHHHCCCEEECCCCCCCC
DAGLYFEIREGAEPRNPLNWLR
CCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]