Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997857

Identifier: 121997857

GI number: 121997857

Start: 1157294

End: 1158955

Strand: Reverse

Name: 121997857

Synonym: Hhal_1066

Alternate gene names: NA

Gene position: 1158955-1157294 (Counterclockwise)

Preceding gene: 121997858

Following gene: 121997856

Centisome position: 43.27

GC content: 71.3

Gene sequence:

>1662_bases
ATGGAACAGCTGCAGACGCTCCTCCAGCGCCTCGACGGTCGAGGCTACAAGGCGTACAAGGACATCCAGGGCCGCCACGC
GTTCCCTGGTTTCACCCTGTGCGTCGACAAGGTCCAGGCTGACCCCTTCGCCGCTCCCTCGCGGATGCGGGCCGTCGTAC
CGTGGCAACAGGTCGCCTTACCGGAGCCGGCCCTGGCCGGAGAGCCCCGGCGCCGCGCGGCGCGCGACTATATCGCGCGG
GCCTTCGCGAACGAAGCAGACGGTGAGCAGGCGGTGCGCATCGATGCCGGCGCGCAGACGGTGCTCGATCGCAGCGCCGT
GCTGTTCACCGATGCCGGGGTCGAGCTGCGCTTCACCGTTGCCTTGCCGGCCCGGGGGCGGACCATCCTCGGGCGCCAGG
CCGCCGAGATCCTCTGCCGGAAGCTGCCGCGGATCGTCGCCGGGGCTACCGAGGCGCAGCGGCTGGATGCCGCCGCGCTG
GAGCGCCACTGCGCGGCGGTGGAGGACCAGCACGCCCTGCGCGGACAGCTTGCCGAGCGTGGTCTGGTCGCCTTTGTCGC
CGATGGGGCCGTGCTGCCGCGGCGCTCCGGCGTGGACGACCGGCCCTTGGCGGACGCCATCCCCTTCGACAGCCCCGATT
CGTTGCGGGTGACGCTGGAGGCGCCGAACGCCGGCTCGATCTCCGGCATGGGGATCCCGCGCGGGATCACCCTGATTGTC
GGGGGTGGCTTCCACGGCAAGTCGACCCTGCTCAACGCCCTGGAACTCGGTGTCTACGACCACAGGCCGGGGGACGGGCG
TGACGGTGTGGTCAGCCTTGAGGACGCGGCCAAGATCCGCGCCGAGGATGGTCGGGCCGTGCACGCCGTGGATCTCTCCC
CCTATATCGGCGAGCTCCCCTTCGGCAAGTCCACGACCGCTTTTTCTACCGATCTGGCCTCCGGCTCCACCAGCCAGGCG
GCGGCCCTGCAGGAGGCGCTGGAGGCGGGCTCGCGGACCCTGCTGGTCGACGAGGACACCTCGGCCACCAACTTCATGAT
CCGCGATCGGCGCATGCAGGCCCTGGTAGCCCGAGACGCCGAGCCGATCACCCCGCTGGTGGATCGCATCGCCGAGCTGC
GTGACCGGTACGGGGTCTCGACCCTGCTGGTGATGGGGGGCTCCGGCGACTATCTGGATAGCGCCGATACGGTGATCCAG
ATGCAGGACTACCGCCCGGCGGACGTCACCGCCGAGGCGCGCCGCGTGGCGACCGAGTACGCCACCGGGCGCCACGCCGA
AATCCGTTCGCCGCTGTCCTGGCCGGCCATGCGGGCCGTGGACGGGCGGACGGTGCGCACCGAAACCAAGCCCGGTAAGC
GCAAGGTTCAGGGCCGGGGCCGGGATACCCTCCTGGTGGGCCGCGAGGCCATCGACCTGCGCGCCGTGGAGCAGATCGCC
GATGCGGCCCAGGTGCGGGCCATCGGCCTGCTGCTCGAGCGGCTCGCCGACAGCGGCCGGGTCGAGGATCCGCCGGCGTG
GGTAGCCGAACTGCTGACGCGCCACTGGGCACAACTGCTGCCCCGTCCCGACGGCGATCTGGCCCGCCCGCGGACGATCG
AGGTCATGGCTGCGCTCAACCGCCTGCGCGGTGTCCGTTTCAACGCCGACGGCGTAGGCTAG

Upstream 100 bases:

>100_bases
TCGGCGCCCTGGCCATCGGCGAGGATCGCGGCGACGTGCGCGGCTGAGCCGGGCCCAGGCCCTTGGCCGGGGCGGTCGGC
CTCGGCTACCGTGTGCCGCC

Downstream 100 bases:

>100_bases
GTTGGAACAGGCCATCGGAGCGGAGGGCAGAGCATGCGGGTGCTGATCATCGGGGCCCACGGGCAGGTGGGACGGCGGCT
GGTGGAGCGGCTCGCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MEQLQTLLQRLDGRGYKAYKDIQGRHAFPGFTLCVDKVQADPFAAPSRMRAVVPWQQVALPEPALAGEPRRRAARDYIAR
AFANEADGEQAVRIDAGAQTVLDRSAVLFTDAGVELRFTVALPARGRTILGRQAAEILCRKLPRIVAGATEAQRLDAAAL
ERHCAAVEDQHALRGQLAERGLVAFVADGAVLPRRSGVDDRPLADAIPFDSPDSLRVTLEAPNAGSISGMGIPRGITLIV
GGGFHGKSTLLNALELGVYDHRPGDGRDGVVSLEDAAKIRAEDGRAVHAVDLSPYIGELPFGKSTTAFSTDLASGSTSQA
AALQEALEAGSRTLLVDEDTSATNFMIRDRRMQALVARDAEPITPLVDRIAELRDRYGVSTLLVMGGSGDYLDSADTVIQ
MQDYRPADVTAEARRVATEYATGRHAEIRSPLSWPAMRAVDGRTVRTETKPGKRKVQGRGRDTLLVGREAIDLRAVEQIA
DAAQVRAIGLLLERLADSGRVEDPPAWVAELLTRHWAQLLPRPDGDLARPRTIEVMAALNRLRGVRFNADGVG

Sequences:

>Translated_553_residues
MEQLQTLLQRLDGRGYKAYKDIQGRHAFPGFTLCVDKVQADPFAAPSRMRAVVPWQQVALPEPALAGEPRRRAARDYIAR
AFANEADGEQAVRIDAGAQTVLDRSAVLFTDAGVELRFTVALPARGRTILGRQAAEILCRKLPRIVAGATEAQRLDAAAL
ERHCAAVEDQHALRGQLAERGLVAFVADGAVLPRRSGVDDRPLADAIPFDSPDSLRVTLEAPNAGSISGMGIPRGITLIV
GGGFHGKSTLLNALELGVYDHRPGDGRDGVVSLEDAAKIRAEDGRAVHAVDLSPYIGELPFGKSTTAFSTDLASGSTSQA
AALQEALEAGSRTLLVDEDTSATNFMIRDRRMQALVARDAEPITPLVDRIAELRDRYGVSTLLVMGGSGDYLDSADTVIQ
MQDYRPADVTAEARRVATEYATGRHAEIRSPLSWPAMRAVDGRTVRTETKPGKRKVQGRGRDTLLVGREAIDLRAVEQIA
DAAQVRAIGLLLERLADSGRVEDPPAWVAELLTRHWAQLLPRPDGDLARPRTIEVMAALNRLRGVRFNADGVG
>Mature_553_residues
MEQLQTLLQRLDGRGYKAYKDIQGRHAFPGFTLCVDKVQADPFAAPSRMRAVVPWQQVALPEPALAGEPRRRAARDYIAR
AFANEADGEQAVRIDAGAQTVLDRSAVLFTDAGVELRFTVALPARGRTILGRQAAEILCRKLPRIVAGATEAQRLDAAAL
ERHCAAVEDQHALRGQLAERGLVAFVADGAVLPRRSGVDDRPLADAIPFDSPDSLRVTLEAPNAGSISGMGIPRGITLIV
GGGFHGKSTLLNALELGVYDHRPGDGRDGVVSLEDAAKIRAEDGRAVHAVDLSPYIGELPFGKSTTAFSTDLASGSTSQA
AALQEALEAGSRTLLVDEDTSATNFMIRDRRMQALVARDAEPITPLVDRIAELRDRYGVSTLLVMGGSGDYLDSADTVIQ
MQDYRPADVTAEARRVATEYATGRHAEIRSPLSWPAMRAVDGRTVRTETKPGKRKVQGRGRDTLLVGREAIDLRAVEQIA
DAAQVRAIGLLLERLADSGRVEDPPAWVAELLTRHWAQLLPRPDGDLARPRTIEVMAALNRLRGVRFNADGVG

Specific function: Unknown

COG id: COG3044

COG function: function code R; Predicted ATPase of the ABC class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019195 [H]

Pfam domain/function: PF09818 ABC_ATPase [H]

EC number: NA

Molecular weight: Translated: 59689; Mature: 59689

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLQTLLQRLDGRGYKAYKDIQGRHAFPGFTLCVDKVQADPFAAPSRMRAVVPWQQVAL
CHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHEEHHHHCCCCCCCHHHCEEECCHHHHCC
PEPALAGEPRRRAARDYIARAFANEADGEQAVRIDAGAQTVLDRSAVLFTDAGVELRFTV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCEEEEEECCCEEEEEE
ALPARGRTILGRQAAEILCRKLPRIVAGATEAQRLDAAALERHCAAVEDQHALRGQLAER
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVAFVADGAVLPRRSGVDDRPLADAIPFDSPDSLRVTLEAPNAGSISGMGIPRGITLIV
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
GGGFHGKSTLLNALELGVYDHRPGDGRDGVVSLEDAAKIRAEDGRAVHAVDLSPYIGELP
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCEEEEEECCCCCCCCC
FGKSTTAFSTDLASGSTSQAAALQEALEAGSRTLLVDEDTSATNFMIRDRRMQALVARDA
CCCCCCCEEHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCC
EPITPLVDRIAELRDRYGVSTLLVMGGSGDYLDSADTVIQMQDYRPADVTAEARRVATEY
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
ATGRHAEIRSPLSWPAMRAVDGRTVRTETKPGKRKVQGRGRDTLLVGREAIDLRAVEQIA
CCCCCHHHCCCCCCCHHHHCCCCEEEECCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHH
DAAQVRAIGLLLERLADSGRVEDPPAWVAELLTRHWAQLLPRPDGDLARPRTIEVMAALN
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RLRGVRFNADGVG
HHCCCEECCCCCC
>Mature Secondary Structure
MEQLQTLLQRLDGRGYKAYKDIQGRHAFPGFTLCVDKVQADPFAAPSRMRAVVPWQQVAL
CHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHEEHHHHCCCCCCCHHHCEEECCHHHHCC
PEPALAGEPRRRAARDYIARAFANEADGEQAVRIDAGAQTVLDRSAVLFTDAGVELRFTV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCEEEEEECCCEEEEEE
ALPARGRTILGRQAAEILCRKLPRIVAGATEAQRLDAAALERHCAAVEDQHALRGQLAER
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVAFVADGAVLPRRSGVDDRPLADAIPFDSPDSLRVTLEAPNAGSISGMGIPRGITLIV
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
GGGFHGKSTLLNALELGVYDHRPGDGRDGVVSLEDAAKIRAEDGRAVHAVDLSPYIGELP
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCCCCCCEEEEEECCCCCCCCC
FGKSTTAFSTDLASGSTSQAAALQEALEAGSRTLLVDEDTSATNFMIRDRRMQALVARDA
CCCCCCCEEHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCC
EPITPLVDRIAELRDRYGVSTLLVMGGSGDYLDSADTVIQMQDYRPADVTAEARRVATEY
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
ATGRHAEIRSPLSWPAMRAVDGRTVRTETKPGKRKVQGRGRDTLLVGREAIDLRAVEQIA
CCCCCHHHCCCCCCCHHHHCCCCEEEECCCCCHHHHCCCCCCEEEECCHHHHHHHHHHHH
DAAQVRAIGLLLERLADSGRVEDPPAWVAELLTRHWAQLLPRPDGDLARPRTIEVMAALN
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RLRGVRFNADGVG
HHCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]