| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997808
Identifier: 121997808
GI number: 121997808
Start: 1088580
End: 1090010
Strand: Reverse
Name: 121997808
Synonym: Hhal_1017
Alternate gene names: NA
Gene position: 1090010-1088580 (Counterclockwise)
Preceding gene: 121997809
Following gene: 121997807
Centisome position: 40.7
GC content: 71.21
Gene sequence:
>1431_bases GTGGGACAGGAGATCGGTCGGGCACGGTTCGGGAGCGATGACTTCAGCGCCTTTCGTCAGCGGCTCCGGGCGGAGACCCG ATTGCTGGGCGAGTGGTTGCGAGCCGGTCGGGTGGCCGAGGGCCCGCCGAGCATCGGCCTGGAGCTGGAGGCGTGGTTGG TGGACGCCGACGGCCGTCCGGCCCCGATCAGTGATCGGGTGTTGAGCCGGGTCGAAGACCCTCGGGTTGAGAACGAGCTG GCCCGGTTTAACCTGGAGATCAACACCGACGTTCACCCGCTGGCCGGAACGCCCCTGCAGGGGCTGCAGACGGAGCTCGC CGAGCGCTGGGCGCGGACGCAACGGGCCGCGGCCGACGCCGGGTGTCGGTTGGCACTGGTCGGCATCCTCCCTTCGGTGC GCGAGGCGGATGTCTGCGTCGAGAACATGACGCCCTCGCCCCGCTACGCGGCGTTGAACGAACAGGTCCTGGCGCTGCGC GGGCGTCGCCCGCTGACCCTCGACATCGAGGGGACGCAGCGCTTTCGCACCGAGCGCCACGACGTCATGCTCGAGGCGGC CACCACCTCCCTACAGCTGCACCTGCAGGTGCCGCCGCAGCGCATGGCGGCATTCTTCAACGCCGCGGTGGCGTTGTCGG CCGCTTCGGTGGCGGTGGCGGCCAATTCGCCGTTCCTGTTCGGTCGCCGCCTGTGGCACGAGAGCCGTATCCCGCTGTTC GAACAGGCGGTGGCGTGCACCCGCCTGGAGCCGCGTGGGGCCGGGACCCTGGCGCGGGTGGGCTTCGGCAGCGGCTACGC CCGCGACGCCCTGTACGGCTTCTTCGTCGAGAATCGGCAGCACCACCCGGTCTTGTTGCCCGAGTTGCAGGATCAACCGG TGGAGGCGCTGGCCCATCTGCGCCTGCACAATGGGACCATCTGGCGCTGGAACCGGCCGCTGGTGGAGGTGGTCGACGGG CAGTGCCAGCTGCGTCTGGAGCACCGGGTGATGGCGGCCGGTCCGACCCTGGCCGACGTGCTGGCCAACGCCGCCTTCTT CTATGGCGCCGTGGCCGAGCTGGCTGAGTCGCGCCCGGGGCTGGTCGAGGAACTGCCTTTCCACATCGCCGAGCAGAACT TCTACGCCGCGGCCCGTTACGGTCTGGAGGCCGAGGTCGAGTGGCTGGATGGCTGGTTCGGCCGGCTGGGCGATCTCGTT ACCGAACGCCTGCTGCCCAAGGCCCGCCGCGGGCTGGTACGGGCCGGGGTGGCGGAGGCGGAAGCCACGGCGCACCTGGG CGTGCTGGAGGAGCGGGTTGCCAGCGGTCGGACGGGCGCGGCCTGGCAGCTGGCCTGGGTGGAGCGCCACGGTGAGGACG ACCAGGCGCTGACCCGGGCCTACCTGGATCGGGCCGCCGACGGCGAGCCGGTCCACCGCTGGCCGCTGTAG
Upstream 100 bases:
>100_bases GGGCCTGGTCCGATATCGGGACCCCGGAGCGGCTCGAGCAACTGCGCCGCGAGGTGGCCACCGGCGCCGCACCGGTGCCG GAGTAACGCGGGGGGGCGAC
Downstream 100 bases:
>100_bases ACACCGATCAGGAGGCAAGAACGGCCCATGCTCAAGACCTACCAGGGACTGCCGAAGGGCCTGCTCGGCGCGGCGGCCCC GGAACTGGAGGACCGGCTCG
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENEL ARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALR GRRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDG QCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLV TERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL
Sequences:
>Translated_476_residues MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENEL ARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALR GRRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDG QCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLV TERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL >Mature_475_residues GQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENELA RFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRG RRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLFE QAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDGQ CQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVT ERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52747; Mature: 52616
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC APISDRVLSRVEDPRVENELARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADA CCCHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRGRRPLTLDIEGTQRFRTERH CCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHH DVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF HEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHH EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHL HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH RLHNGTIWRWNRPLVEVVDGQCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPG HHCCCEEEEECCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC LVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVTERLLPKARRGLVRAGVAEA HHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH EATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL HHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC APISDRVLSRVEDPRVENELARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADA CCCHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRGRRPLTLDIEGTQRFRTERH CCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHH DVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF HEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHH EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHL HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH RLHNGTIWRWNRPLVEVVDGQCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPG HHCCCEEEEECCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC LVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVTERLLPKARRGLVRAGVAEA HHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH EATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL HHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA