Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997721

Identifier: 121997721

GI number: 121997721

Start: 1007210

End: 1008226

Strand: Reverse

Name: 121997721

Synonym: Hhal_0930

Alternate gene names: NA

Gene position: 1008226-1007210 (Counterclockwise)

Preceding gene: 121997722

Following gene: 121997720

Centisome position: 37.64

GC content: 77.58

Gene sequence:

>1017_bases
ATGTTGCCTGTCTCGGTCCAGGGGCCGCTGGATGCGCGGGCCTGGGTGGACCTCGATGCCGCTGGGTGCCCGGGGATCGC
GGTGGCGGTCAAGGCCGGCTTCCGCGGCGGCGATGCCGCCCGGCTGCGCCTCGATGACGACACGCCGGCGCTGGAGACCG
CCGAACGCTACGCCGGTGATCCCGCCGCTCACGCCCCGCTCACCGCACCCGACTGCGTTCCCTTCAAGCACGGGGCCGAG
TGCCTGCTCCACGGCGCGGTACAGGTCGGCCCCGGGCGGTCGCAGGCAGCGGCCTGTCTGGGGGTCGAGGACGCCGGCGG
CCGGCCCCGGTTCGGCCCCAAGCGGGTGTGGGCGGTGGCCGAGCCGCCGCCGCGGGCCTCCGATCCGCCCGGTGCGCTGG
AGGGGCCGGTGCCGCTCACCTACGAACTGGCCTACGGCGGACCACTCGGTGGGCCGCGGCACCGGCGTTACGCTCGCAAC
CCGGTGGGCCGGGGGCATCGGGCGGCGTGGTGGGGTGCCGCCGCCGGGCCGTCGCCCCGGCTGCTGTGGGACGACCACCG
CGCCACCCGGCGCGGGGCGCCCGCCGGCTTCGGGCCTCTGGCGGCGGCCTGGGCGCCCCGGGCCCGGCGTTTCGGGCGCC
TGGATGCCCATGCCTATCGCCAGGGCCAGCTGCGCTACCGCCGCCTGCCCCGGCCCGACGCCTGGAATGCCGCCCCGGCA
GACCAGTGCCTCGACACCCCGTTGTGCGGCGACGAGCGCATCCGCCTGCAGGGGGTCCTCCCTGGGGTGGACCCGGACCA
CACGGTCATCTGGCAACTGCCCGGCGGCGGTCCGCAGGTCACCCTGCACCGCCCGGGGCGCGGACAGCGGGTGACGGTGC
AGGCGGACACCCTGGGGATCGACGCCGACGCCGGCCGGGTGTGGCTGGTCTGGCGGGGGTGGGTGCCGGAGCCGGCGCCG
GGGCCGGGCTGGGCATTGCGGGTCGATGCCGACGGGATCGGGGGCGGAGAGCGATGA

Upstream 100 bases:

>100_bases
ACGGCGCCATCCGCATCGACGGCGAGGTGGTCGAGGCCAGGGCCCGCGGCGAGCACCGCATCCGCGGGGCCCGCGTCGCC
ATCAACTGAGGTGCCCTGGA

Downstream 100 bases:

>100_bases
ACCACGCCACCACCGCCCCCGTGCTGTTCGAGCCGCTGGCCGCCTGGCACGCCGCCGGCACCGATCCCGAGGCCCTGGCC
CGTGCGGTGACCGACGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLPVSVQGPLDARAWVDLDAAGCPGIAVAVKAGFRGGDAARLRLDDDTPALETAERYAGDPAAHAPLTAPDCVPFKHGAE
CLLHGAVQVGPGRSQAAACLGVEDAGGRPRFGPKRVWAVAEPPPRASDPPGALEGPVPLTYELAYGGPLGGPRHRRYARN
PVGRGHRAAWWGAAAGPSPRLLWDDHRATRRGAPAGFGPLAAAWAPRARRFGRLDAHAYRQGQLRYRRLPRPDAWNAAPA
DQCLDTPLCGDERIRLQGVLPGVDPDHTVIWQLPGGGPQVTLHRPGRGQRVTVQADTLGIDADAGRVWLVWRGWVPEPAP
GPGWALRVDADGIGGGER

Sequences:

>Translated_338_residues
MLPVSVQGPLDARAWVDLDAAGCPGIAVAVKAGFRGGDAARLRLDDDTPALETAERYAGDPAAHAPLTAPDCVPFKHGAE
CLLHGAVQVGPGRSQAAACLGVEDAGGRPRFGPKRVWAVAEPPPRASDPPGALEGPVPLTYELAYGGPLGGPRHRRYARN
PVGRGHRAAWWGAAAGPSPRLLWDDHRATRRGAPAGFGPLAAAWAPRARRFGRLDAHAYRQGQLRYRRLPRPDAWNAAPA
DQCLDTPLCGDERIRLQGVLPGVDPDHTVIWQLPGGGPQVTLHRPGRGQRVTVQADTLGIDADAGRVWLVWRGWVPEPAP
GPGWALRVDADGIGGGER
>Mature_338_residues
MLPVSVQGPLDARAWVDLDAAGCPGIAVAVKAGFRGGDAARLRLDDDTPALETAERYAGDPAAHAPLTAPDCVPFKHGAE
CLLHGAVQVGPGRSQAAACLGVEDAGGRPRFGPKRVWAVAEPPPRASDPPGALEGPVPLTYELAYGGPLGGPRHRRYARN
PVGRGHRAAWWGAAAGPSPRLLWDDHRATRRGAPAGFGPLAAAWAPRARRFGRLDAHAYRQGQLRYRRLPRPDAWNAAPA
DQCLDTPLCGDERIRLQGVLPGVDPDHTVIWQLPGGGPQVTLHRPGRGQRVTVQADTLGIDADAGRVWLVWRGWVPEPAP
GPGWALRVDADGIGGGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35801; Mature: 35801

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVSVQGPLDARAWVDLDAAGCPGIAVAVKAGFRGGDAARLRLDDDTPALETAERYAGD
CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCC
PAAHAPLTAPDCVPFKHGAECLLHGAVQVGPGRSQAAACLGVEDAGGRPRFGPKRVWAVA
CCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEC
EPPPRASDPPGALEGPVPLTYELAYGGPLGGPRHRRYARNPVGRGHRAAWWGAAAGPSPR
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCC
LLWDDHRATRRGAPAGFGPLAAAWAPRARRFGRLDAHAYRQGQLRYRRLPRPDAWNAAPA
EEECCCCHHHCCCCCCCCHHHHHHCHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCCCCH
DQCLDTPLCGDERIRLQGVLPGVDPDHTVIWQLPGGGPQVTLHRPGRGQRVTVQADTLGI
HHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEE
DADAGRVWLVWRGWVPEPAPGPGWALRVDADGIGGGER
ECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MLPVSVQGPLDARAWVDLDAAGCPGIAVAVKAGFRGGDAARLRLDDDTPALETAERYAGD
CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCC
PAAHAPLTAPDCVPFKHGAECLLHGAVQVGPGRSQAAACLGVEDAGGRPRFGPKRVWAVA
CCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEC
EPPPRASDPPGALEGPVPLTYELAYGGPLGGPRHRRYARNPVGRGHRAAWWGAAAGPSPR
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCC
LLWDDHRATRRGAPAGFGPLAAAWAPRARRFGRLDAHAYRQGQLRYRRLPRPDAWNAAPA
EEECCCCHHHCCCCCCCCHHHHHHCHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCCCCH
DQCLDTPLCGDERIRLQGVLPGVDPDHTVIWQLPGGGPQVTLHRPGRGQRVTVQADTLGI
HHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEE
DADAGRVWLVWRGWVPEPAPGPGWALRVDADGIGGGER
ECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA