Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997714

Identifier: 121997714

GI number: 121997714

Start: 996893

End: 997510

Strand: Reverse

Name: 121997714

Synonym: Hhal_0923

Alternate gene names: NA

Gene position: 997510-996893 (Counterclockwise)

Preceding gene: 121997716

Following gene: 121997713

Centisome position: 37.24

GC content: 72.33

Gene sequence:

>618_bases
ATGAAAATTGCGGTGTTTGGTGGGACCCGCGGCGTCGGGGCCGAGGTGGTGCGCCAGGCCCTGGGGCGCGGATGGCGGTG
CCGGGTGCTGGCGCGCAGCGCCGATCGGGTGCCGGAGCTGCCCGGGGTCGAGGTGGTGGTCGGCGACGTGCTCGATCCCG
AGGCCGTGGGCCGGGCCCTCTACGACTGCGATGGCGCGGTCATCGCCCTGGGGCAGACCCGTCGCAACCCGCCGCGGTTG
TGCAGTGAGGGCACCCGGGTGATCGTCGAGGCCATGCAGCAGCAGGGCGTCCCGCGGGTGGTGGCGGTCTCGGCCATGGG
GGTGGGGGACAGCTACGCCCAGGTGTCGGTGGTCTTCCGGCTGCTGATCCGCACCCTGATGAAGGGTCTGATGACGGATA
AGGAGCGCCTCGAGCAGGTCCTGGCTGCCAGCGATCGCGACTGGGTGGTGGTGCGCCCCGGGCGGCTGACCAACCGACCG
GGGCGGGGCGAGTGGCGCGCCGGCACGGATCACGACACCGGCGCCGGGTCGGTCAGCCGGGCCGATGTGGCGACGTTCCT
GCTCGAGCAGCTGGGCGACGACCGTTACCTGCGTCAGGCGCCGTACATCACCGGGTGA

Upstream 100 bases:

>100_bases
AGCGTCGGGCGGTAACCTGGGGCGCCAAATTTTGGGGGCGCCTCTGCAAACACGGGTGGACTGTAGCACACTCAACTTCC
CAAGGGGAGGAAAATCATCT

Downstream 100 bases:

>100_bases
GGACCGGTGCCAGCGCCTGGGTCGACCGGTGGTGCTGTGGCGCCGTGGTCACGCCGGCGGCGGCTGGCTACTATGGGCGG
TGTATGAGGTCCATCGAGCC

Product: 3-beta hydroxysteroid dehydrogenase/isomerase

Products: NA

Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NmrA Family Protein; Flavin Reductase; Secreted Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerases; Oxidoreductase; LOW QUALITY PROTEIN NAD-Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nmra Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NADH-Flavin Reductase

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKIAVFGGTRGVGAEVVRQALGRGWRCRVLARSADRVPELPGVEVVVGDVLDPEAVGRALYDCDGAVIALGQTRRNPPRL
CSEGTRVIVEAMQQQGVPRVVAVSAMGVGDSYAQVSVVFRLLIRTLMKGLMTDKERLEQVLAASDRDWVVVRPGRLTNRP
GRGEWRAGTDHDTGAGSVSRADVATFLLEQLGDDRYLRQAPYITG

Sequences:

>Translated_205_residues
MKIAVFGGTRGVGAEVVRQALGRGWRCRVLARSADRVPELPGVEVVVGDVLDPEAVGRALYDCDGAVIALGQTRRNPPRL
CSEGTRVIVEAMQQQGVPRVVAVSAMGVGDSYAQVSVVFRLLIRTLMKGLMTDKERLEQVLAASDRDWVVVRPGRLTNRP
GRGEWRAGTDHDTGAGSVSRADVATFLLEQLGDDRYLRQAPYITG
>Mature_205_residues
MKIAVFGGTRGVGAEVVRQALGRGWRCRVLARSADRVPELPGVEVVVGDVLDPEAVGRALYDCDGAVIALGQTRRNPPRL
CSEGTRVIVEAMQQQGVPRVVAVSAMGVGDSYAQVSVVFRLLIRTLMKGLMTDKERLEQVLAASDRDWVVVRPGRLTNRP
GRGEWRAGTDHDTGAGSVSRADVATFLLEQLGDDRYLRQAPYITG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4502419, Length=206, Percent_Identity=33.495145631068, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161078145, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24645509, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22197; Mature: 22197

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVFGGTRGVGAEVVRQALGRGWRCRVLARSADRVPELPGVEVVVGDVLDPEAVGRAL
CEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCEEEECCCCCHHHHHHHH
YDCDGAVIALGQTRRNPPRLCSEGTRVIVEAMQQQGVPRVVAVSAMGVGDSYAQVSVVFR
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
LLIRTLMKGLMTDKERLEQVLAASDRDWVVVRPGRLTNRPGRGEWRAGTDHDTGAGSVSR
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ADVATFLLEQLGDDRYLRQAPYITG
HHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MKIAVFGGTRGVGAEVVRQALGRGWRCRVLARSADRVPELPGVEVVVGDVLDPEAVGRAL
CEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCEEEECCCCCHHHHHHHH
YDCDGAVIALGQTRRNPPRLCSEGTRVIVEAMQQQGVPRVVAVSAMGVGDSYAQVSVVFR
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
LLIRTLMKGLMTDKERLEQVLAASDRDWVVVRPGRLTNRPGRGEWRAGTDHDTGAGSVSR
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ADVATFLLEQLGDDRYLRQAPYITG
HHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA