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The map label for this gene is 121997557

Identifier: 121997557

GI number: 121997557

Start: 848128

End: 848793

Strand: Reverse

Name: 121997557

Synonym: Hhal_0764

Alternate gene names: NA

Gene position: 848793-848128 (Counterclockwise)

Preceding gene: 121997558

Following gene: 121997541

Centisome position: 31.69

GC content: 65.02

Gene sequence:

>666_bases
GTGGTCTCGCCGCTGCTGGCCAATGTCTTCCTCCATGAGGTACTGGACGAGTGGTTCGAGACGCAGGCCAAGCCGCGGCT
CCGCGGTCCGGCCCAGCTGGTCCGGTATGCCGACGACGCCGTGTTGCTCTTCAAGCTCCGGGATGACGCCGAGCGGGTCC
TCAAGGTGCTCCCGAGGCGGTTCGAGAAGTATGGGCTGGAGCTGCATCCGGAGAAGACCCGGTTGATCGGCTTCCAGCGC
CCACCTCGGAACGTCAAGCGCCCCTGGCCTAAGCCGGAGACCTTCGACCTGCTCGGTTTCACCCTCTACTGGGGGCGATC
CCGGCGCGGCAAGTGGGTCGTCAAGGCCAAGACGGCCAAGGACCGCTTGAGCCGGAGCCTGCGCAACATCCACCGCTGGT
GCCGGCAGAACCGCCACCGGCCCGTGGAAGAGCAGTGGGAAGTGCTCTGCCGTAAAATGAAGGGGCACTATGCGTACTAC
GGCGTCACGGGCAACTACGACGCTTTGGATGCGTTCTCCCAGGGTGTCCGGCGACGCTGGCGCTTTTGGCTAGCCCGGCG
CTCTCAGAAAGGCCAGATGCCGTGGTGGCGCTTCTCTCACCTCCTTCACCGGCTCCCTCTGCCACAGCCGCGGATCATGA
AGCCTTATGCACGCCCTGCCATCTAG

Upstream 100 bases:

>100_bases
CGACTACGAGGCCCGGCTTAATAGCTAACACCGTGTCCACGTTCGCTGGGTAAGACCAGGACAGTGGCAGCGCCTCGGAG
AGGGCACCCCGCAGGGCGGG

Downstream 100 bases:

>100_bases
CGAAACCATCACTCGCGGAGCCGCTTGCTGGAAATCGGCACGAGCGGTTCTCATCGGGGGGCCGGCTGGGCGACCAGCCG
GTCTACCCAACATGAAGAGA

Product: RNA-directed DNA polymerase

Products: NA

Alternate protein names: Reverse Transcriptase; Reverse Transcriptase/Maturase; Reverse Transcriptase/Maturase Family Protein; Group II Intron-Encoding Maturase; RNA-Directed DNA Polymerase Retrotranscriptase; Group II Intron-Encoded Maturase Truncated; Maturase-Group II Intron; Maturase

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQLVRYADDAVLLFKLRDDAERVLKVLPRRFEKYGLELHPEKTRLIGFQR
PPRNVKRPWPKPETFDLLGFTLYWGRSRRGKWVVKAKTAKDRLSRSLRNIHRWCRQNRHRPVEEQWEVLCRKMKGHYAYY
GVTGNYDALDAFSQGVRRRWRFWLARRSQKGQMPWWRFSHLLHRLPLPQPRIMKPYARPAI

Sequences:

>Translated_221_residues
MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQLVRYADDAVLLFKLRDDAERVLKVLPRRFEKYGLELHPEKTRLIGFQR
PPRNVKRPWPKPETFDLLGFTLYWGRSRRGKWVVKAKTAKDRLSRSLRNIHRWCRQNRHRPVEEQWEVLCRKMKGHYAYY
GVTGNYDALDAFSQGVRRRWRFWLARRSQKGQMPWWRFSHLLHRLPLPQPRIMKPYARPAI
>Mature_221_residues
MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQLVRYADDAVLLFKLRDDAERVLKVLPRRFEKYGLELHPEKTRLIGFQR
PPRNVKRPWPKPETFDLLGFTLYWGRSRRGKWVVKAKTAKDRLSRSLRNIHRWCRQNRHRPVEEQWEVLCRKMKGHYAYY
GVTGNYDALDAFSQGVRRRWRFWLARRSQKGQMPWWRFSHLLHRLPLPQPRIMKPYARPAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26722; Mature: 26722

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQLVRYADDAVLLFKLRDDAERVLKVLPRR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHH
FEKYGLELHPEKTRLIGFQRPPRNVKRPWPKPETFDLLGFTLYWGRSRRGKWVVKAKTAK
HHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEEEEEHHHH
DRLSRSLRNIHRWCRQNRHRPVEEQWEVLCRKMKGHYAYYGVTGNYDALDAFSQGVRRRW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
RFWLARRSQKGQMPWWRFSHLLHRLPLPQPRIMKPYARPAI
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSPLLANVFLHEVLDEWFETQAKPRLRGPAQLVRYADDAVLLFKLRDDAERVLKVLPRR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHH
FEKYGLELHPEKTRLIGFQRPPRNVKRPWPKPETFDLLGFTLYWGRSRRGKWVVKAKTAK
HHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEEEEEHHHH
DRLSRSLRNIHRWCRQNRHRPVEEQWEVLCRKMKGHYAYYGVTGNYDALDAFSQGVRRRW
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
RFWLARRSQKGQMPWWRFSHLLHRLPLPQPRIMKPYARPAI
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA