| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997485
Identifier: 121997485
GI number: 121997485
Start: 770497
End: 770802
Strand: Reverse
Name: 121997485
Synonym: Hhal_0688
Alternate gene names: NA
Gene position: 770802-770497 (Counterclockwise)
Preceding gene: 121997486
Following gene: 121997484
Centisome position: 28.78
GC content: 65.36
Gene sequence:
>306_bases ATGACTTCCGTTGTCGAACTCTACGAGCAGCTGGCCTCTGCGCCCGACGATAAGACGCGTGCGCGTCTGATCGCGGAGGC GTTCGAGCGCATGGAGGAGCGCTACCCGGAGGTCAAGGACCTGGCGACGCAGACGCACCTGCGCGAGACGGAACTGCGCC TGCAAAAGGAGATTGAGCAGCTACGGGGGGATCTGACGAGAGAGATCAAGCAGCTGCGCTCCGGCGTCGTGCGCTGGGTG GTGGGCCTGCTTGCCGGGCAGACGGCCGTGATCCTGGCCGCGTTCTTTGCGGTCGCCTGGCTGTAG
Upstream 100 bases:
>100_bases GGTGTGGCAGGATCTCAAGCGGATCCGCGGGCTGGTCGAGGAATGACAGCGCGGCGCCCCCGCGTTGCCGTGCTCCCTCG GTGGTGCTAGCGTCGTTCCC
Downstream 100 bases:
>100_bases CAGCGCCGGGGCTGAACAACCACAAGAAAGACACAGCCATGGCGGATTCGATCGGCAGAGCCCGGCCGATGACCTACGAA GACCTCCCCACCGTGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTSVVELYEQLASAPDDKTRARLIAEAFERMEERYPEVKDLATQTHLRETELRLQKEIEQLRGDLTREIKQLRSGVVRWV VGLLAGQTAVILAAFFAVAWL
Sequences:
>Translated_101_residues MTSVVELYEQLASAPDDKTRARLIAEAFERMEERYPEVKDLATQTHLRETELRLQKEIEQLRGDLTREIKQLRSGVVRWV VGLLAGQTAVILAAFFAVAWL >Mature_100_residues TSVVELYEQLASAPDDKTRARLIAEAFERMEERYPEVKDLATQTHLRETELRLQKEIEQLRGDLTREIKQLRSGVVRWVV GLLAGQTAVILAAFFAVAWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11585; Mature: 11453
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVVELYEQLASAPDDKTRARLIAEAFERMEERYPEVKDLATQTHLRETELRLQKEIEQ CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LRGDLTREIKQLRSGVVRWVVGLLAGQTAVILAAFFAVAWL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure TSVVELYEQLASAPDDKTRARLIAEAFERMEERYPEVKDLATQTHLRETELRLQKEIEQ CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LRGDLTREIKQLRSGVVRWVVGLLAGQTAVILAAFFAVAWL HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA