| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is rimI [H]
Identifier: 121997484
GI number: 121997484
Start: 769985
End: 770458
Strand: Reverse
Name: rimI [H]
Synonym: Hhal_0687
Alternate gene names: 121997484
Gene position: 770458-769985 (Counterclockwise)
Preceding gene: 121997485
Following gene: 121997483
Centisome position: 28.77
GC content: 66.67
Gene sequence:
>474_bases ATGGCGGATTCGATCGGCAGAGCCCGGCCGATGACCTACGAAGACCTCCCCACCGTGCTCGCCATCGAGCAGCGCTCGGT GGCCTACCCCTGGAGTGGGCACATCTTCCGTGACTGCATGTCGGCGGGCTACGGCTGCTTCGTCCAGCAGCAGGGGCGGG AGATCCTCGGTTATCTGGTGGTCAGCTGCGCCGCCGGCGAGGGCACCATCCTCAACATCTGCGTCGACCCGGACTGGCGC CGGCACGGTATCGCGAGCCACTTGATCGCCGTGGCCGTCGAGCGGGCCGAGGTCATGCAGGCCGAGAATCTCTTCCTTGA GGTGCGCCCGTCCAATACGGCCGCCATCGCCCTCTACGAGCGCCACGGCTTCCACGAGGTGGGCCGGCGGCCGGACTACT ATCCGGCCGCCTCCGGTCGTGAGGATGCGCTGATCATGGCAAGGGTCATTCTGCCTGGCTGGAATACGCCTTGA
Upstream 100 bases:
>100_bases GCCTGCTTGCCGGGCAGACGGCCGTGATCCTGGCCGCGTTCTTTGCGGTCGCCTGGCTGTAGCAGCGCCGGGGCTGAACA ACCACAAGAAAGACACAGCC
Downstream 100 bases:
>100_bases GGCCTTGCCGGCTTCGGCTCGTGACAGGATGATGGGTCGATGAACCGCTGAGGACGCGGCTATGGATCGAGACGAAGTAT TGTTCCTGCTTGGTCGCAGT
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MADSIGRARPMTYEDLPTVLAIEQRSVAYPWSGHIFRDCMSAGYGCFVQQQGREILGYLVVSCAAGEGTILNICVDPDWR RHGIASHLIAVAVERAEVMQAENLFLEVRPSNTAAIALYERHGFHEVGRRPDYYPAASGREDALIMARVILPGWNTP
Sequences:
>Translated_157_residues MADSIGRARPMTYEDLPTVLAIEQRSVAYPWSGHIFRDCMSAGYGCFVQQQGREILGYLVVSCAAGEGTILNICVDPDWR RHGIASHLIAVAVERAEVMQAENLFLEVRPSNTAAIALYERHGFHEVGRRPDYYPAASGREDALIMARVILPGWNTP >Mature_156_residues ADSIGRARPMTYEDLPTVLAIEQRSVAYPWSGHIFRDCMSAGYGCFVQQQGREILGYLVVSCAAGEGTILNICVDPDWRR HGIASHLIAVAVERAEVMQAENLFLEVRPSNTAAIALYERHGFHEVGRRPDYYPAASGREDALIMARVILPGWNTP
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=133, Percent_Identity=42.1052631578947, Blast_Score=110, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17419; Mature: 17288
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSIGRARPMTYEDLPTVLAIEQRSVAYPWSGHIFRDCMSAGYGCFVQQQGREILGYLV CCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHH VSCAAGEGTILNICVDPDWRRHGIASHLIAVAVERAEVMQAENLFLEVRPSNTAAIALYE HHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEE RHGFHEVGRRPDYYPAASGREDALIMARVILPGWNTP CCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure ADSIGRARPMTYEDLPTVLAIEQRSVAYPWSGHIFRDCMSAGYGCFVQQQGREILGYLV CCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHH VSCAAGEGTILNICVDPDWRRHGIASHLIAVAVERAEVMQAENLFLEVRPSNTAAIALYE HHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEE RHGFHEVGRRPDYYPAASGREDALIMARVILPGWNTP CCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]