| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is hflK [H]
Identifier: 121997461
GI number: 121997461
Start: 746301
End: 747488
Strand: Reverse
Name: hflK [H]
Synonym: Hhal_0664
Alternate gene names: 121997461
Gene position: 747488-746301 (Counterclockwise)
Preceding gene: 121997462
Following gene: 121997460
Centisome position: 27.91
GC content: 68.18
Gene sequence:
>1188_bases ATGGCGTGGAATGAGCCCGGCGGCGGCAGCCGCGACCCCTGGGGCGGTGGCCCCAAAGGAGGCGGCAGTGGGGGGCCGCC CGATCTGGATGAGGTCTTCCGTAAGCTGCGTGCGCAGGTGCAGGGCCTGTTCGGTGGGCGCATGCCCAGTGGGCCCTCCC GCGGCCCCGGGGCGACCGGCATCAGCCTCTTGGCCCTGGGTGCCTTCGTGGTCTGGATGCTCTCCGGGATCTACATCGTC GACCAGGGCTGGCGCGGGGTGGAGCTGACCTTCGGTCGCCACTCGGATACCACGGAGCCCGGGCCGCACTGGCACTGGCC GCGGCCCATCGGCCAGGTCGAGCGGGTCAACGTCGAGCAGCGGCGCATCGCCGAGGTCGGCTACGAGTCGATGCAGAATC GTGCCCGGCCGGTTTCTGCCGAGGCGTTGATGATTACCCGCGACGAGAACATCGTCGATGTGCGGATCGCGGCGCAGTAC GAGGTCAGCGATCCGTTCCTCTACCTGTTCAACTTCCGCATGCCGGAGCAGACCCTCAAGCAGGTCACCGAGAGCGCGGT GCGCGAGATCATCGGCAAGCGCGAGCTTCAGTACGTGCTGACCGAGGGGCGGACCGAGGTGGCCCAGGAAACCGGACGGC TGCTCCAGGAAGTGATGGATGACTACCGCACGGGTCTGTCGGTGGTGCAGGTGGCGGTCCAGGATATCCAGCCCCCGGAG CCGGTACAGCCGGCCTTCGAGGATGCCATCCGCGCCCGCGAGGACGAGCAGCGCACCATCAACCGGGCCCAGGCCTACGC CAACGAGTTGATCCCGCGGGCCCAGGGCCAGGCGGCGCGCATTCTCGAGGAAGCAGACGGTTACCGCGAGCAGGTCATCG CCCAGGCCGAGGGTGACGCCGCCCGCTTCGAGGCGCTGGTGCCGCAGTACCGGGCCGACCCGCAGCTGATGCGTCAGCGC ATCTACCTGGAGACTATGGAGGAGATCCTGGGCCGGGTGCCCAAGGTGATGCTCGACTCGGAGTCCAGCCAGTCGCTGAT GTACCTGCCGCTCGACAAGCTCATGGATCGTCGGGGGAGCACCACGGCGCTCTCTGGCGAGACCAATATCGATGTACCGC AGGAACGGGACGCCATCTCGCCGACCCAGCGAGCACGAGAGGCGCTCCGTGATAGGGGGACGCGCTGA
Upstream 100 bases:
>100_bases GTTGTCCCGGCCTGACTTCGGTTGCGGTTGGCGGGGCAGCTCCCTAGAATCGGACCGTTCGATCGACGGCAGATCGTCTT AGTCACATACGGAGTCCTGA
Downstream 100 bases:
>100_bases TGCGAATCCTGAAGAACGTCGTGTTGCCCCTGCTGGTGGTGGCCGCGATTCTCGGCTACTTCTCGGTGTTCACCGTCTCC GAAAAGGAGGTGGCACTGAA
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAWNEPGGGSRDPWGGGPKGGGSGGPPDLDEVFRKLRAQVQGLFGGRMPSGPSRGPGATGISLLALGAFVVWMLSGIYIV DQGWRGVELTFGRHSDTTEPGPHWHWPRPIGQVERVNVEQRRIAEVGYESMQNRARPVSAEALMITRDENIVDVRIAAQY EVSDPFLYLFNFRMPEQTLKQVTESAVREIIGKRELQYVLTEGRTEVAQETGRLLQEVMDDYRTGLSVVQVAVQDIQPPE PVQPAFEDAIRAREDEQRTINRAQAYANELIPRAQGQAARILEEADGYREQVIAQAEGDAARFEALVPQYRADPQLMRQR IYLETMEEILGRVPKVMLDSESSQSLMYLPLDKLMDRRGSTTALSGETNIDVPQERDAISPTQRAREALRDRGTR
Sequences:
>Translated_395_residues MAWNEPGGGSRDPWGGGPKGGGSGGPPDLDEVFRKLRAQVQGLFGGRMPSGPSRGPGATGISLLALGAFVVWMLSGIYIV DQGWRGVELTFGRHSDTTEPGPHWHWPRPIGQVERVNVEQRRIAEVGYESMQNRARPVSAEALMITRDENIVDVRIAAQY EVSDPFLYLFNFRMPEQTLKQVTESAVREIIGKRELQYVLTEGRTEVAQETGRLLQEVMDDYRTGLSVVQVAVQDIQPPE PVQPAFEDAIRAREDEQRTINRAQAYANELIPRAQGQAARILEEADGYREQVIAQAEGDAARFEALVPQYRADPQLMRQR IYLETMEEILGRVPKVMLDSESSQSLMYLPLDKLMDRRGSTTALSGETNIDVPQERDAISPTQRAREALRDRGTR >Mature_394_residues AWNEPGGGSRDPWGGGPKGGGSGGPPDLDEVFRKLRAQVQGLFGGRMPSGPSRGPGATGISLLALGAFVVWMLSGIYIVD QGWRGVELTFGRHSDTTEPGPHWHWPRPIGQVERVNVEQRRIAEVGYESMQNRARPVSAEALMITRDENIVDVRIAAQYE VSDPFLYLFNFRMPEQTLKQVTESAVREIIGKRELQYVLTEGRTEVAQETGRLLQEVMDDYRTGLSVVQVAVQDIQPPEP VQPAFEDAIRAREDEQRTINRAQAYANELIPRAQGQAARILEEADGYREQVIAQAEGDAARFEALVPQYRADPQLMRQRI YLETMEEILGRVPKVMLDSESSQSLMYLPLDKLMDRRGSTTALSGETNIDVPQERDAISPTQRAREALRDRGTR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=375, Percent_Identity=41.6, Blast_Score=258, Evalue=7e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 44154; Mature: 44023
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGGGSRDPWGGGPKGGGSGGPPDLDEVFRKLRAQVQGLFGGRMPSGPSRGPGATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH ISLLALGAFVVWMLSGIYIVDQGWRGVELTFGRHSDTTEPGPHWHWPRPIGQVERVNVEQ HHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHH RRIAEVGYESMQNRARPVSAEALMITRDENIVDVRIAAQYEVSDPFLYLFNFRMPEQTLK HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHH QVTESAVREIIGKRELQYVLTEGRTEVAQETGRLLQEVMDDYRTGLSVVQVAVQDIQPPE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVQPAFEDAIRAREDEQRTINRAQAYANELIPRAQGQAARILEEADGYREQVIAQAEGDA CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCH ARFEALVPQYRADPQLMRQRIYLETMEEILGRVPKVMLDSESSQSLMYLPLDKLMDRRGS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECHHHHHCCCCC TTALSGETNIDVPQERDAISPTQRAREALRDRGTR CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AWNEPGGGSRDPWGGGPKGGGSGGPPDLDEVFRKLRAQVQGLFGGRMPSGPSRGPGATG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH ISLLALGAFVVWMLSGIYIVDQGWRGVELTFGRHSDTTEPGPHWHWPRPIGQVERVNVEQ HHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHH RRIAEVGYESMQNRARPVSAEALMITRDENIVDVRIAAQYEVSDPFLYLFNFRMPEQTLK HHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHH QVTESAVREIIGKRELQYVLTEGRTEVAQETGRLLQEVMDDYRTGLSVVQVAVQDIQPPE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVQPAFEDAIRAREDEQRTINRAQAYANELIPRAQGQAARILEEADGYREQVIAQAEGDA CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCH ARFEALVPQYRADPQLMRQRIYLETMEEILGRVPKVMLDSESSQSLMYLPLDKLMDRRGS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECHHHHHCCCCC TTALSGETNIDVPQERDAISPTQRAREALRDRGTR CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]