Click here to switch to the map view.

The map label for this gene is 121997438

Identifier: 121997438

GI number: 121997438

Start: 717264

End: 718244

Strand: Reverse

Name: 121997438

Synonym: Hhal_0639

Alternate gene names: NA

Gene position: 718244-717264 (Counterclockwise)

Preceding gene: 121997439

Following gene: 121997437

Centisome position: 26.82

GC content: 65.65

Gene sequence:

>981_bases
ATGAGTGCCATCAAGCTCAGCCAGGAAGAACTGGAGGCCCTGGCCGGCCTCCCCAGCCTGGCGCTGCGTGTCTATATCCT
GGGCATCCGTCCGCACATGGACTACAGCACGGGCCTGGTTGGCGCGCAGCGTCGCATCAGCTGGCAGTCGTTGCGGGAAG
CGAGCTATGTCGAGCCGCACCAAGGGCTCACAGACACCGGCACCCCGAGCAAGTCGTCCGTGCGGCGTGCCGTCGACTGG
CTCATCCGGTCGGGATTGGCCATCGATTGTACGCAGGGCAAGCGCCTGATCTTCTACTGTCCGCTGGCGCAGACGGATTC
TTCTTCCCAGGAAAAACCCGGCACAAACCCGACACAATCCCGGCACGATCATCCCGGCACGCATGCCGACACGACTGAAT
CCGCTCATGGCGGGATGTGGACGGGGGATCTCGGCACGGAAACCGGCATAAAGCCGGCACGCCCTGACGAGCCTCATCCC
GGCACACCTCCGGTCTCCGGTGTCCGGAAGAGAGCCCCATCACACACCGCGGACGGTTCCAGGTTAGAGGGCGCACCGGT
GTGTGACGCGGAGTGTGCGGACGCCGGCAAGGCCCCCGTGCAGCAGAGCGGGCAGGGGCCGTCGTCGGCCACGACCGATA
GCCGCGCCATCTTCGAGCGCTTCTGGGCGGCCTACCCGAGGAAGGTCAAGCAGAGCGAGGCCTACCAGATTTTCCGCAAG
CGGGGACTGTGGTGGCGCATCGACACCATCCTCAGCGATATCGAACGTCGACAGCGTGAGGACCGGCGCTGGCGCGCGGG
GTATATCCCCAACCCGGGGAATTACCTGAAAGACGAGCGCTGGCTCGAGTCCATCGAGCGCGGCCGGCAAGTCGGCGGGG
CCGGCCCGGCCGCTCCCAACACGCAGTCATTGGAGAAGAGCTACCAAGCCGAGGCCGAGAAGTTCGCAGCCGCCGGTTTC
GAAACGGACCCCGACTGGTAG

Upstream 100 bases:

>100_bases
CTGCTCAGGCCGTATGGCAGCTCGTCCAGGAGGCCGATTCCATCCAGCGAGAGTACGCCGCGCGACGCCAGGGTGTGCCG
GCGGTGGAGGAGGGGCGGTG

Downstream 100 bases:

>100_bases
GAGGCAGTATGCAAAGCATCGGGCACGCCCTCAACAGTGGGTATTGCGAGCAGCAGGAGCACTGCCCGGAGCACGGGCAC
TATTCGGCCATCTACACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Vir Region Protein; Homolog Of LvrA Protein

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSAIKLSQEELEALAGLPSLALRVYILGIRPHMDYSTGLVGAQRRISWQSLREASYVEPHQGLTDTGTPSKSSVRRAVDW
LIRSGLAIDCTQGKRLIFYCPLAQTDSSSQEKPGTNPTQSRHDHPGTHADTTESAHGGMWTGDLGTETGIKPARPDEPHP
GTPPVSGVRKRAPSHTADGSRLEGAPVCDAECADAGKAPVQQSGQGPSSATTDSRAIFERFWAAYPRKVKQSEAYQIFRK
RGLWWRIDTILSDIERRQREDRRWRAGYIPNPGNYLKDERWLESIERGRQVGGAGPAAPNTQSLEKSYQAEAEKFAAAGF
ETDPDW

Sequences:

>Translated_326_residues
MSAIKLSQEELEALAGLPSLALRVYILGIRPHMDYSTGLVGAQRRISWQSLREASYVEPHQGLTDTGTPSKSSVRRAVDW
LIRSGLAIDCTQGKRLIFYCPLAQTDSSSQEKPGTNPTQSRHDHPGTHADTTESAHGGMWTGDLGTETGIKPARPDEPHP
GTPPVSGVRKRAPSHTADGSRLEGAPVCDAECADAGKAPVQQSGQGPSSATTDSRAIFERFWAAYPRKVKQSEAYQIFRK
RGLWWRIDTILSDIERRQREDRRWRAGYIPNPGNYLKDERWLESIERGRQVGGAGPAAPNTQSLEKSYQAEAEKFAAAGF
ETDPDW
>Mature_325_residues
SAIKLSQEELEALAGLPSLALRVYILGIRPHMDYSTGLVGAQRRISWQSLREASYVEPHQGLTDTGTPSKSSVRRAVDWL
IRSGLAIDCTQGKRLIFYCPLAQTDSSSQEKPGTNPTQSRHDHPGTHADTTESAHGGMWTGDLGTETGIKPARPDEPHPG
TPPVSGVRKRAPSHTADGSRLEGAPVCDAECADAGKAPVQQSGQGPSSATTDSRAIFERFWAAYPRKVKQSEAYQIFRKR
GLWWRIDTILSDIERRQREDRRWRAGYIPNPGNYLKDERWLESIERGRQVGGAGPAAPNTQSLEKSYQAEAEKFAAAGFE
TDPDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35920; Mature: 35789

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIKLSQEELEALAGLPSLALRVYILGIRPHMDYSTGLVGAQRRISWQSLREASYVEPH
CCCCCCCHHHHHHHHCCHHHEEEEHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
QGLTDTGTPSKSSVRRAVDWLIRSGLAIDCTQGKRLIFYCPLAQTDSSSQEKPGTNPTQS
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
RHDHPGTHADTTESAHGGMWTGDLGTETGIKPARPDEPHPGTPPVSGVRKRAPSHTADGS
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
RLEGAPVCDAECADAGKAPVQQSGQGPSSATTDSRAIFERFWAAYPRKVKQSEAYQIFRK
CCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLWWRIDTILSDIERRQREDRRWRAGYIPNPGNYLKDERWLESIERGRQVGGAGPAAPN
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TQSLEKSYQAEAEKFAAAGFETDPDW
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAIKLSQEELEALAGLPSLALRVYILGIRPHMDYSTGLVGAQRRISWQSLREASYVEPH
CCCCCCHHHHHHHHCCHHHEEEEHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
QGLTDTGTPSKSSVRRAVDWLIRSGLAIDCTQGKRLIFYCPLAQTDSSSQEKPGTNPTQS
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC
RHDHPGTHADTTESAHGGMWTGDLGTETGIKPARPDEPHPGTPPVSGVRKRAPSHTADGS
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
RLEGAPVCDAECADAGKAPVQQSGQGPSSATTDSRAIFERFWAAYPRKVKQSEAYQIFRK
CCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLWWRIDTILSDIERRQREDRRWRAGYIPNPGNYLKDERWLESIERGRQVGGAGPAAPN
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
TQSLEKSYQAEAEKFAAAGFETDPDW
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA