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The map label for this gene is insF1 [H]

Identifier: 121997414

GI number: 121997414

Start: 693978

End: 694577

Strand: Reverse

Name: insF1 [H]

Synonym: Hhal_0614

Alternate gene names: 121997414

Gene position: 694577-693978 (Counterclockwise)

Preceding gene: 121997415

Following gene: 121997411

Centisome position: 25.93

GC content: 64.17

Gene sequence:

>600_bases
GTGAAGTACGCGTTCATCGATCAGCAGCGTCACGAGCACCGGATCCAGGCGATGTGCCGCGTCCTTGGCGTCGCTCGCAG
CGGCTTCTACGCATGGTGCCGGAACAAGGCGGCCCGCGCCGCACGGGAAGAACGCCAGCAGGCCTTTGATGGGCAGGTGC
AAGAGGCCTTCGAAGACTCCAGGCAACGCTCTGGAGCGCCTCGACTGACGCGAGAGCTGGACGGGCAAGGCGTGTCGGCC
AATCGCAAAACCGTGGCCCGGAGCATGCGCCGTCAGGGCCTCCGGGCACGCACGTCACGCCGGTTTAAGGTGACGACGAA
CTCGGCTCACAGCCTGCCGGTCGCGCCAAACCACTTGGCCCAGCACTTTGAAGCCGAGCAGCGGAACCAGAAATGGACTG
GCGACATCACGTATTTGGCGACCGGCGAAGGATGGCTCTATCTCGCGGTCGTCCTGGATCTTTGTGGCCGCAAAGTGATC
GGTTGGGCCATGCGTGGGGATTCCAGTCAAGTGGGTGGCCTGTTCCACGTGATGAGGGGTGCCCGTTCCACCGCATGTGG
GGGGCCCGTTCCACGGGAAGTGGTGGGGCCATTCCACTGA

Upstream 100 bases:

>100_bases
TGGCCGAGGAGAATGCCCGGCTCAAGCGTCAGCTCTCGGAAGCGAATGAGGAGCTGTCGATCACAAAAAAGGCCGCGGCG
TACTTCGCGAAAAACCAGAA

Downstream 100 bases:

>100_bases
ATTGGGGTGCCTTCCCGGGCAGTAGGTCCACATCAGGCCACCGGCTCATGGGTTCGACTCCGAGGTGGTTGTCTCGAGGG
CATCCTGGGAGCGACGCATG

Product: IS3 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDSRQRSGAPRLTRELDGQGVSA
NRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLAQHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVI
GWAMRGDSSQVGGLFHVMRGARSTACGGPVPREVVGPFH

Sequences:

>Translated_199_residues
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDSRQRSGAPRLTRELDGQGVSA
NRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLAQHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVI
GWAMRGDSSQVGGLFHVMRGARSTACGGPVPREVVGPFH
>Mature_199_residues
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDSRQRSGAPRLTRELDGQGVSA
NRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLAQHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVI
GWAMRGDSSQVGGLFHVMRGARSTACGGPVPREVVGPFH

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=163, Percent_Identity=30.0613496932515, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI1788405, Length=164, Percent_Identity=57.3170731707317, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1787263, Length=164, Percent_Identity=57.3170731707317, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1786753, Length=164, Percent_Identity=57.3170731707317, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1786570, Length=164, Percent_Identity=57.3170731707317, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1786490, Length=164, Percent_Identity=57.3170731707317, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1789981, Length=160, Percent_Identity=26.25, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22380; Mature: 22380

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDS
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RQRSGAPRLTRELDGQGVSANRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLA
HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHH
QHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVIGWAMRGDSSQVGGLFHVMRG
HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHC
ARSTACGGPVPREVVGPFH
CCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MKYAFIDQQRHEHRIQAMCRVLGVARSGFYAWCRNKAARAAREERQQAFDGQVQEAFEDS
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RQRSGAPRLTRELDGQGVSANRKTVARSMRRQGLRARTSRRFKVTTNSAHSLPVAPNHLA
HHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHH
QHFEAEQRNQKWTGDITYLATGEGWLYLAVVLDLCGRKVIGWAMRGDSSQVGGLFHVMRG
HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHC
ARSTACGGPVPREVVGPFH
CCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]