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The map label for this gene is scpA [H]

Identifier: 121997384

GI number: 121997384

Start: 659674

End: 660501

Strand: Reverse

Name: scpA [H]

Synonym: Hhal_0583

Alternate gene names: 121997384

Gene position: 660501-659674 (Counterclockwise)

Preceding gene: 121997385

Following gene: 121997383

Centisome position: 24.66

GC content: 68.48

Gene sequence:

>828_bases
GTGAGCGAGACCGCCGCCGAGGCGACCCCTGCCGAGGATCCAGCCGGCGGCGGCGAGCCGGTGGCCCGCGTCGGCGATGA
AGCGCTGCGGCGGCTGCCGGACGACCTTTACATCCCCCCGGACGCCCTCGAGGTCTTCCTCGAGGCGTTCGAGGGGCCGC
TGGACCTGCTCCTCTACCTGATCCGGCGACAGAACCTCGACATCCTCGATATCCCCATCGCCGAGATCACACGGCAGTAC
ATGGAGTATGTCGAGCTGATGCGGGAGATGCGCCTGGAGCTGGCCGCCGAGTACCTGGTGATGGCGGCCATGCTCGCGGA
GATCAAATCGCGCATGCTGCTCCCCCGGCCGGCGGCGGCCGAGGAGGACGAGGAGGAGGACCACGACCCGCGGGCCGAGC
TGATCCGTCGGCTGCAGGAGTACGAGCGCTTCAAGAAGGTGGCCGAGCAGATCGACGAACTCCCCCGGGTGGGGCGGGAC
ATCTTCCCGGCGGCGGCCGAGGCGCCGGCGTGCCAGCCCCAGGCGCAACCGCCGGCGGTCAGCCTGCGCGAGCTGGTGCT
GGCCTTCTCGGAGGTCATGCGCCGGGCGCAGCTGAACGAGAACCACCAGGTTGAGCGTGAGGCGATCAGCATCCGTGAGC
GGATGAGCGATACCCTGAGTCGGCTCAACAATGAGCGCTACACCCCGTTCCAGGCGCTGTTTCAGGTCGAGGAGGGGCGC
ACCGGAGTGGTCGTGACCTTCCTCGCGCTGCTCGAACTGGTGCGCGAGTCCATGGTGGAACTGGTCCAGGCCGACGCCTT
TGCCCCGATCTATATCCGCGCGCGATGA

Upstream 100 bases:

>100_bases
AGCATGTGCGCTCGGTCATCGTCGACGGCTGTGAGCAGGCCCGCGAGGAGGCGCGAGAGACCCTTGGCGAGGTGCGCAGT
GCCATGGGCCTGGAGTACCG

Downstream 100 bases:

>100_bases
ACATGCCACCACTCAAGCAGATCATCGAGGCGGCGTTGCTCGCCGCCGGCGAAGCCCTGACCTTCGAGCGCATCCAGGGT
CTGTTCGATGCCGACCGGGC

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSETAAEATPAEDPAGGGEPVARVGDEALRRLPDDLYIPPDALEVFLEAFEGPLDLLLYLIRRQNLDILDIPIAEITRQY
MEYVELMREMRLELAAEYLVMAAMLAEIKSRMLLPRPAAAEEDEEEDHDPRAELIRRLQEYERFKKVAEQIDELPRVGRD
IFPAAAEAPACQPQAQPPAVSLRELVLAFSEVMRRAQLNENHQVEREAISIRERMSDTLSRLNNERYTPFQALFQVEEGR
TGVVVTFLALLELVRESMVELVQADAFAPIYIRAR

Sequences:

>Translated_275_residues
MSETAAEATPAEDPAGGGEPVARVGDEALRRLPDDLYIPPDALEVFLEAFEGPLDLLLYLIRRQNLDILDIPIAEITRQY
MEYVELMREMRLELAAEYLVMAAMLAEIKSRMLLPRPAAAEEDEEEDHDPRAELIRRLQEYERFKKVAEQIDELPRVGRD
IFPAAAEAPACQPQAQPPAVSLRELVLAFSEVMRRAQLNENHQVEREAISIRERMSDTLSRLNNERYTPFQALFQVEEGR
TGVVVTFLALLELVRESMVELVQADAFAPIYIRAR
>Mature_274_residues
SETAAEATPAEDPAGGGEPVARVGDEALRRLPDDLYIPPDALEVFLEAFEGPLDLLLYLIRRQNLDILDIPIAEITRQYM
EYVELMREMRLELAAEYLVMAAMLAEIKSRMLLPRPAAAEEDEEEDHDPRAELIRRLQEYERFKKVAEQIDELPRVGRDI
FPAAAEAPACQPQAQPPAVSLRELVLAFSEVMRRAQLNENHQVEREAISIRERMSDTLSRLNNERYTPFQALFQVEEGRT
GVVVTFLALLELVRESMVELVQADAFAPIYIRAR

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31317; Mature: 31186

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETAAEATPAEDPAGGGEPVARVGDEALRRLPDDLYIPPDALEVFLEAFEGPLDLLLYL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
IRRQNLDILDIPIAEITRQYMEYVELMREMRLELAAEYLVMAAMLAEIKSRMLLPRPAAA
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEDEEEDHDPRAELIRRLQEYERFKKVAEQIDELPRVGRDIFPAAAEAPACQPQAQPPAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHH
SLRELVLAFSEVMRRAQLNENHQVEREAISIRERMSDTLSRLNNERYTPFQALFQVEEGR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TGVVVTFLALLELVRESMVELVQADAFAPIYIRAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
SETAAEATPAEDPAGGGEPVARVGDEALRRLPDDLYIPPDALEVFLEAFEGPLDLLLYL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
IRRQNLDILDIPIAEITRQYMEYVELMREMRLELAAEYLVMAAMLAEIKSRMLLPRPAAA
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEDEEEDHDPRAELIRRLQEYERFKKVAEQIDELPRVGRDIFPAAAEAPACQPQAQPPAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHH
SLRELVLAFSEVMRRAQLNENHQVEREAISIRERMSDTLSRLNNERYTPFQALFQVEEGR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TGVVVTFLALLELVRESMVELVQADAFAPIYIRAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]